RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 LPOP22079 712 aaPredicted RBP16.67■□□□□ 0.26
VSTM1-201ENST00000338372 ATP5OP48047 213 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 PPM1FP49593 454 aaPredicted RBP16.67■□□□□ 0.26
VSTM1-201ENST00000338372 ZNF75DP51815 510 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 ZNF140P52738 457 aaPredicted RBP16.67■□□□□ 0.26
VSTM1-201ENST00000338372 FOXM1Q08050 763 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 KCNAB2Q13303 367 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 LAMB3Q13751 1172 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 GTF2H3Q13889 308 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 BCL7AQ4VC05 210 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 CAPRIN2Q6IMN6 1127 aaKnown RBP16.67■□□□□ 0.26
VSTM1-201ENST00000338372 FAM92BQ6ZTR7 304 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 PRICKLE2Q7Z3G6 844 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 TMEM139Q8IV31 216 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 ESX1Q8N693 406 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 LILRA3Q8N6C8 439 aaPredicted RBP16.67■□□□□ 0.26
VSTM1-201ENST00000338372 SPDYE1Q8NFV5 336 aaPredicted RBP16.67■□□□□ 0.26
VSTM1-201ENST00000338372 OR13C4Q8NGS5 318 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 OR2L2Q8NH16 312 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 MRFAP1L1Q96HT8 127 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 APOL2Q9BQE5 337 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 FAM117AQ9C073 453 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 AKIRIN1Q9H9L7 192 aaPredicted RBP16.67■□□□□ 0.26
VSTM1-201ENST00000338372 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.67■□□□□ 0.26
VSTM1-201ENST00000338372 PKP3Q9Y446 797 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 COL12A1Q99715 3063 aa16.67■□□□□ 0.26
VSTM1-201ENST00000338372 GRID2IPA4D2P6 1211 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 C5orf60A6NFR6 353 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 CYSRT1A8MQ03 144 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 LDB2O43679 373 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 ANXA9O76027 345 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 KIAA0754O94854 1291 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 MTHFD1P11586 935 aaKnown RBP16.66■□□□□ 0.26
VSTM1-201ENST00000338372 FOLR1P15328 257 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 VCLP18206 1134 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 CYLC1P35663 651 aaPredicted RBP16.66■□□□□ 0.26
VSTM1-201ENST00000338372 CSRP3P50461 194 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 SPA17Q15506 151 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
VSTM1-201ENST00000338372 FNBP1LQ5T0N5 605 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 C6orf15Q6UXA7 325 aaPredicted RBP16.66■□□□□ 0.26
VSTM1-201ENST00000338372 GALNT6Q8NCL4 622 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 CCDC110Q8TBZ0 833 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 STARD8Q92502 1023 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 ZDHHC12Q96GR4 267 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 SPATA13Q96N96 652 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 MAP3K3Q99759 626 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 EFHD1Q9BUP0 239 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 ULBP3Q9BZM4 244 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 TRIM4Q9C037 500 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 RBSNQ9H1K0 784 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 CLMPQ9H6B4 373 aa16.66■□□□□ 0.26
VSTM1-201ENST00000338372 CFAP20Q9Y6A4 193 aaKnown RBP16.66■□□□□ 0.26
VSTM1-201ENST00000338372 NBASA2RRP1 2371 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 IGLV3-16A0A075B6K0 115 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 TRBV5-4A0A0C4DH59 114 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 A0A0U1RQJ8 604 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 CCDC66A2RUB6 948 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 OR5K3A6NET4 321 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 PRKAR1AP10644 381 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 PSMA3P25788 255 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 CCR10P46092 362 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 EIF3EP60228 445 aaKnown RBP16.65■□□□□ 0.26
VSTM1-201ENST00000338372 KCNC4Q03721 635 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 IRGCQ6NXR0 463 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 DUS1LQ6P1R4 473 aaKnown RBP16.65■□□□□ 0.26
VSTM1-201ENST00000338372 ATG14Q6ZNE5 492 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 TMTC1Q8IUR5 882 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 D2HGDHQ8N465 521 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 ZFPM2Q8WW38 1151 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 ZNF514Q96K75 400 aaPredicted RBP16.65■□□□□ 0.26
VSTM1-201ENST00000338372 CALR3Q96L12 384 aaKnown RBP16.65■□□□□ 0.26
VSTM1-201ENST00000338372 RMDN2Q96LZ7 410 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 TTC25Q96NG3 672 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 FSD1LQ9BXM9 530 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 ZCCHC2Q9C0B9 1178 aaKnown RBP16.65■□□□□ 0.26
VSTM1-201ENST00000338372 WWP1Q9H0M0 922 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 ASB8Q9H765 288 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 CROTQ9UKG9 612 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 PCDHGA6Q9Y5G7 932 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 FER1L5A0AVI2 2057 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 HECTD1Q9ULT8 2610 aa16.65■□□□□ 0.26
VSTM1-201ENST00000338372 KCNN4O15554 427 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 MSH3P20585 1137 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 HALP42357 657 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 CDKN1CP49918 316 aaPredicted RBP16.64■□□□□ 0.25
VSTM1-201ENST00000338372 KLF1Q13351 362 aaPredicted RBP16.64■□□□□ 0.25
VSTM1-201ENST00000338372 SPARCL1Q14515 664 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 KCNAB1Q14722 419 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 ITPRIPL1Q6GPH6 555 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 PWWP2BQ6NUJ5 590 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 DET1Q7L5Y6 550 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 CDKL3Q8IVW4 592 aaPredicted RBP16.64■□□□□ 0.25
VSTM1-201ENST00000338372 ACRBPQ8NEB7 543 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 UBXN4Q92575 508 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 KIAA1143Q96AT1 154 aaPredicted RBP16.64■□□□□ 0.25
VSTM1-201ENST00000338372 PPM1MQ96MI6 270 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 NRTNQ99748 197 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 ANP32EQ9BTT0 268 aa16.64■□□□□ 0.25
VSTM1-201ENST00000338372 SLC24A2Q9UI40 661 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms