RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Krt88Q9CPR6 171 aa10.15□□□□□ -0.79
Lig4-201ENSMUST00000095476 Uqcrc1Q9CZ13 480 aaKnown RBP10.15□□□□□ -0.79
Lig4-201ENSMUST00000095476 EefsecQ9JHW4 583 aa10.15□□□□□ -0.79
Lig4-201ENSMUST00000095476 Clec2iQ9WVF9 217 aa10.15□□□□□ -0.79
Lig4-201ENSMUST00000095476 Carm1Q9WVG6 608 aa10.15□□□□□ -0.79
Lig4-201ENSMUST00000095476 Speer4eK7N6S8 255 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Mtnd2P03893 345 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Zfp28P10078 825 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Polr3bP59470 1133 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 TankP70347 448 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Xrra1Q3U3V8 786 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Gal3st4Q3V1B8 480 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Gm2163Q6PCY5 473 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Msantd1Q8BIL2 278 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Gk5Q8BX05 534 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 TrhdeQ8K093 1025 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 OptcQ920A0 328 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Dsn1Q9CYC5 348 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cyp2c55Q9D816 490 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Erp27Q9D8U3 272 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Gtf2e2Q9D902 292 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Chst7Q9EP78 484 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Nectin3Q9JLB9 549 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Aldh3b2E9Q3E1 479 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Csf2P01587 141 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tfap2aP34056 437 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Prkg2Q61410 762 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tll1Q62381 1013 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Znf512Q69Z99 562 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rasa4Q6PFQ7 802 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 PdprQ7TSQ8 878 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cyth4Q80YW0 393 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cgrrf1Q8BMJ7 332 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Zbtb33Q8BN78 671 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Wdr59Q8C0M0 992 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Hectd2Q8CDU6 774 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Q922M7 232 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cmc1Q9CPZ8 106 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 2310003L06RikQ9CV82 495 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 NarfQ9CYQ7 462 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Mrto4Q9D0I8 239 aaKnown RBP10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Prmt2Q9R144 448 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Socs2O35717 198 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 AcadlP51174 430 aaKnown RBP10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Smyd5Q3TYX3 416 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Trim24Q64127 1051 aaKnown RBP10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rhbdf1Q6PIX5 856 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ap3s2Q8BSZ2 193 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Pi4k2bQ8CBQ5 469 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Galnt18Q8K1B9 622 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Fbxo33Q8VE08 562 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Lysmd3Q99LE3 305 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Smurf1Q9CUN6 731 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ubqln5Q9D4I8 510 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Uba7Q9DBK7 977 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Jph1Q9ET80 660 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rgs17Q9QZB0 210 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 ChmlQ9QZD5 621 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tyk2Q9R117 1184 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Smarcb1Q9Z0H3 385 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cntnap5cQ0V8T7 1305 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Slc6a21A0A1B0GSD2 748 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 A0A1Y7VIU7 259 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ndufaf6A2AIL4 333 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Zfp809G3X9G7 402 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Arfip1G5E8V9 373 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Vmn2r67K7N6T2 851 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Vipr1P97751 459 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Gpat2Q14DK4 801 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Nr0b1Q61066 472 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Dlx3Q64205 287 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 AtminQ6P9S1 818 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Slitrk5Q810B7 957 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 RfkQ8CFV9 155 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Olfr1325Q8VF43 315 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 GmfbQ9CQI3 142 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tmem80Q9D3H0 123 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Taf8Q9EQH4 308 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Il1rl2Q9ERS7 574 aa10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Znf638Q61464 1960 aaKnown RBP10.14□□□□□ -0.79
Lig4-201ENSMUST00000095476 Vmn2r-ps130A0A140T8U3 855 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Gm4778L7N229 365 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Sema3aO08665 772 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Capn5O08688 640 aaKnown RBP10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 ShdO88834 343 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ccnb2P30276 398 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Apoc3P33622 99 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Gabarapl2P60521 117 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Dnaja1P63037 397 aaKnown RBP10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Clca4bQ3UW98 925 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Coq8bQ566J8 533 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Znrf3Q5SSZ7 913 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tfap2cQ61312 449 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cpsf6Q6NVF9 551 aaKnown RBP10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Eri1Q7TMF2 345 aaKnown RBP10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ttc29Q80VM3 471 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ace2Q8R0I0 805 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Zmynd11Q8R5C8 602 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cers2Q924Z4 380 aa10.13□□□□□ -0.79
Lig4-201ENSMUST00000095476 Sntg1Q925E1 517 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms