RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CNSTQ6PJW8 725 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 CAPN12Q6ZSI9 719 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 CHST15Q7LFX5 561 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-219ENST00000555323 AMZ2Q86W34 360 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 TRAPPC5Q8IUR0 188 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 OTUD6BQ8N6M0 293 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 BEND7Q8N7W2 519 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-219ENST00000555323 ZNF548Q8NEK5 533 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-219ENST00000555323 OR2I1PQ8NGU4 316 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 CCL4L1Q8NHW4 92 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 CAVIN3Q969G5 261 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 CCM2Q9BSQ5 444 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 EDEM2Q9BV94 578 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 GSDMCQ9BYG8 508 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 EPB41L4BQ9H329 900 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 ACSS3Q9H6R3 686 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 VPS37BQ9H9H4 285 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 TMEM9BQ9NQ34 198 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 UCKL1Q9NWZ5 548 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 PCOLCE2Q9UKZ9 415 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 CRYL1Q9Y2S2 319 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 PRKAB1Q9Y478 270 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 PLEKHM1Q9Y4G2 1056 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 RALGAPA1Q6GYQ0 2036 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 DNAH14Q0VDD8 3507 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 YY2O15391 372 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 ACSL3O95573 720 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 FTH1P02794 183 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 PKMP14618 531 aaKnown RBP12.47□□□□□ -0.41
SYNE2-219ENST00000555323 FMO4P31512 558 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 NAB1Q13506 487 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 C1orf61Q13536 156 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 SLC29A2Q14542 456 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 SMAD1Q15797 465 aaKnown RBP12.47□□□□□ -0.41
SYNE2-219ENST00000555323 AASDHQ4L235 1098 aaPredicted RBP12.47□□□□□ -0.41
SYNE2-219ENST00000555323 CTSL3PQ5NE16 218 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 UBAP2Q5T6F2 1119 aaKnown RBP12.47□□□□□ -0.41
SYNE2-219ENST00000555323 METRNLQ641Q3 311 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 ZNF549Q6P9A3 640 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 OGFOD3Q6PK18 319 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 CRTC3Q6UUV7 619 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 ABRAXAS1Q6UWZ7 409 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 XKR5Q6UX68 686 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 WASH2PQ6VEQ5 465 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 ZC3HC1Q86WB0 502 aaKnown RBP12.47□□□□□ -0.41
SYNE2-219ENST00000555323 GKN2Q86XP6 184 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 LMX1AQ8TE12 382 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 NAT14Q8WUY8 206 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 PANX3Q96QZ0 392 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 CYTH2Q99418 400 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 CPNE1Q99829 537 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 DUSP23Q9BVJ7 150 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 WASH6PQ9NQA3 447 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 FBXO6Q9NRD1 293 aaPredicted RBP12.47□□□□□ -0.41
SYNE2-219ENST00000555323 KLHL42Q9P2K6 505 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 GNPTGQ9UJJ9 305 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 CORO1CQ9ULV4 474 aaPredicted RBP12.47□□□□□ -0.41
SYNE2-219ENST00000555323 MED16Q9Y2X0 877 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 PSAT1Q9Y617 370 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 CABIN1Q9Y6J0 2220 aa12.47□□□□□ -0.41
SYNE2-219ENST00000555323 A0A087WUV0 522 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 UBA6A0AVT1 1052 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 A6NCN8 305 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 C4orf47A7E2U8 309 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 GDF9O60383 454 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 SDC3O75056 442 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 CELA2BP08218 269 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 ACP5P13686 325 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 CD59P13987 128 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 VCLP18206 1134 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 AK4P27144 223 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 GP5P40197 560 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 CD151P48509 253 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 CSE1LP55060 971 aaKnown RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 EIF3BP55884 814 aaKnown RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 PLOD1Q02809 727 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 GRTP1Q5TC63 336 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 STPG1Q5TH74 334 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 PTRHD1Q6GMV3 140 aaKnown RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 STRA8Q7Z7C7 330 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 TAF8Q7Z7C8 310 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 C17orf82Q86X59 251 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 FAM181AQ8N9Y4 354 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 KCNJ9Q92806 393 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 AARSD1Q9BTE6 412 aaKnown RBP12.46□□□□□ -0.41
SYNE2-219ENST00000555323 TSSK1BQ9BXA7 367 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 RHOJQ9H4E5 214 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 KLC4Q9NSK0 619 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 NLGN3Q9NZ94 848 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 TAAR2Q9P1P5 351 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 SLC17A6Q9P2U8 582 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 FETUBQ9UGM5 382 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 ACSL5Q9ULC5 683 aa12.46□□□□□ -0.41
SYNE2-219ENST00000555323 LRP4O75096 1905 aa12.46□□□□□ -0.42
SYNE2-219ENST00000555323 EP300Q09472 2414 aaPredicted RBP12.46□□□□□ -0.42
SYNE2-219ENST00000555323 ADAMTS9Q9P2N4 1935 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 SLC5A10A0PJK1 596 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 IQCF5A8MTL0 148 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 LIN7AO14910 233 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms