RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 ANAPC5Q9UJX4 755 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 ACSL5Q9ULC5 683 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 MSRB2Q9Y3D2 182 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 MRFAP1Q9Y605 127 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 PTPRBP23467 1997 aa16.96■□□□□ 0.31
LMX1B-203ENST00000526117 ARHGEF17Q96PE2 2063 aaPredicted RBP16.96■□□□□ 0.31
LMX1B-203ENST00000526117 ZCWPW2A0A1B0GU75 182 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 EFCAB8A8MWE9 144 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 GOLGA8MH3BSY2 632 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 CD3EAPO15446 510 aaKnown RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 RAD51CO43502 376 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 URI1O94763 535 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 TTC4O95801 387 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 ADARP55265 1226 aaKnown RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 MAZP56270 477 aaKnown RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 UBE2IP63279 158 aaKnown RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 RPA4Q13156 261 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 TYSND1Q2T9J0 566 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 PLA2G4EQ3MJ16 856 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 ANKRD20A4Q4UJ75 823 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 RNF187Q5TA31 235 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 HES3Q5TGS1 186 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 DUPD1Q68J44 220 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 MRNIPQ6NTE8 343 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 CASC4Q6P4E1 433 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 XKR5Q6UX68 686 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 CCNI2Q6ZMN8 369 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 SPRED1Q7Z699 444 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 SLC9B2Q86UD5 537 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 LRRC6Q86X45 466 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 SFTPA2Q8IWL1 248 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 LMNTD2Q8IXW0 634 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 PDIK1LQ8N165 341 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 BEND7Q8N7W2 519 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 PATE1Q8WXA2 126 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 SH3KBP1Q96B97 665 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 CCDC97Q96F63 343 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 CCM2Q9BSQ5 444 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 ABCG4Q9H172 646 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 OSGEPL1Q9H4B0 414 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 STN1Q9H668 368 aaKnown RBP16.95■□□□□ 0.3
LMX1B-203ENST00000526117 PRDM8Q9NQV8 689 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 WHRNQ9P202 907 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 RABGEF1Q9UJ41 708 aa16.95■□□□□ 0.3
LMX1B-203ENST00000526117 VAPBO95292 243 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 POLBP06746 335 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 BRAFP15056 766 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 PGAM1P18669 254 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 OGNP20774 298 aaKnown RBP16.94■□□□□ 0.3
LMX1B-203ENST00000526117 RPL21P46778 160 aaKnown RBP16.94■□□□□ 0.3
LMX1B-203ENST00000526117 ITGA8P53708 1063 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 TERF1P54274 439 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 EPHA4P54764 986 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 C2orf54Q08AI8 447 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 SEMA3AQ14563 771 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 DET1Q7L5Y6 550 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 KIF18AQ8NI77 898 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 STAMBPL1Q96FJ0 436 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.94■□□□□ 0.3
LMX1B-203ENST00000526117 PHACTR1Q9C0D0 580 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 RAB17Q9H0T7 212 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 LRRN3Q9H3W5 708 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 EPB41L1Q9H4G0 881 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 POT1Q9NUX5 634 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 MARCH4Q9P2E8 410 aaPredicted RBP16.94■□□□□ 0.3
LMX1B-203ENST00000526117 CPNE7Q9UBL6 633 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 CLCA2Q9UQC9 943 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 DNAJC16Q9Y2G8 782 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 RPS6KL1Q9Y6S9 549 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 FAM169AQ9Y6X4 670 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 SPTBN2O15020 2390 aa16.94■□□□□ 0.3
LMX1B-203ENST00000526117 GOLGA4Q13439 2230 aaKnown RBP16.93■□□□□ 0.3
LMX1B-203ENST00000526117 LILRA5A6NI73 299 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 RHPN2P1A8MT19 583 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 E7ESA3 106 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 PFDN6O15212 129 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 PPM1DO15297 605 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 FTH1P02794 183 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 OR56A5P0C7T3 313 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 RPS3P23396 243 aaKnown RBP eCLIP16.93■□□□□ 0.3
LMX1B-203ENST00000526117 HALP42357 657 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 DRG2P55039 364 aaKnown RBP16.93■□□□□ 0.3
LMX1B-203ENST00000526117 GPLD1P80108 840 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 PLOD1Q02809 727 aaPredicted RBP16.93■□□□□ 0.3
LMX1B-203ENST00000526117 HHEXQ03014 270 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 NFE2L1Q14494 772 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 FAM83HQ6ZRV2 1179 aaPredicted RBP16.93■□□□□ 0.3
LMX1B-203ENST00000526117 CLDN19Q8N6F1 224 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 MNS1Q8NEH6 495 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 ZFPM2Q8WW38 1151 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 FCRL3Q96P31 734 aaPredicted RBP16.93■□□□□ 0.3
LMX1B-203ENST00000526117 DEPDC7Q96QD5 511 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 EBNA1BP2Q99848 306 aaKnown RBP16.93■□□□□ 0.3
LMX1B-203ENST00000526117 DPYSL5Q9BPU6 564 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 P2RY12Q9H244 342 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 KLK13Q9UKR3 277 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 VPS9D1Q9Y2B5 631 aa16.93■□□□□ 0.3
LMX1B-203ENST00000526117 UTP11Q9Y3A2 253 aaKnown RBP16.93■□□□□ 0.3
LMX1B-203ENST00000526117 A0A1W2PQM1 296 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 D6RAR5 112 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms