RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CLDN19Q8N6F1 224 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 UBLCP1Q8WVY7 318 aaPredicted RBP19.76■□□□□ 0.75
USP53-203ENST00000507597 LRRC61Q9BV99 259 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 P2RY12Q9H244 342 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 ACSS3Q9H6R3 686 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 PLAC1Q9HBJ0 212 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 PARD6AQ9NPB6 346 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 KLC4Q9NSK0 619 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 KLF15Q9UIH9 416 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 WDFY4Q6ZS81 3184 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 PI4KAP42356 2102 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 OR5K4A6NMS3 321 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 LIN7AO14910 233 aaPredicted RBP19.75■□□□□ 0.75
USP53-203ENST00000507597 FLRT2O43155 660 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 RIPK2O43353 540 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 OR1I1O60431 355 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 AHSGP02765 367 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 HOXD11P31277 338 aaPredicted RBP19.75■□□□□ 0.75
USP53-203ENST00000507597 GP5P40197 560 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 SKIV2L2P42285 1042 aaKnown RBP19.75■□□□□ 0.75
USP53-203ENST00000507597 HALP42357 657 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 DMPKQ09013 629 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 BNIP3Q12983 259 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 RPA4Q13156 261 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 BRD3Q15059 726 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 TTLL9Q3SXZ7 439 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 KBTBD12Q3ZCT8 623 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 LGSNQ5TDP6 509 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 GSPT2Q8IYD1 628 aaKnown RBP19.75■□□□□ 0.75
USP53-203ENST00000507597 PPM1NQ8N819 430 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 AVL9Q8NBF6 648 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 SAP25Q8TEE9 199 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 ASZ1Q8WWH4 475 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 CAVIN3Q969G5 261 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 PHOX2BQ99453 314 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 OSGEPL1Q9H4B0 414 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 PPCSQ9HAB8 311 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 SPATS2LQ9NUQ6 558 aaKnown RBP19.75■□□□□ 0.75
USP53-203ENST00000507597 NLGN3Q9NZ94 848 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 KLHL42Q9P2K6 505 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 RALGAPA1Q6GYQ0 2036 aa19.75■□□□□ 0.75
USP53-203ENST00000507597 VPS26AO75436 327 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 HAUS5O94927 633 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 TRIM16O95361 564 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 FUCA1P04066 466 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 APOA4P06727 396 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 MYBL2P10244 700 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 SDHBP21912 280 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 TGM1P22735 817 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 GRK6P43250 576 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 RPIAP49247 311 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 SLC12A2P55011 1212 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 MPP1Q00013 466 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 C1orf61Q13536 156 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 SYTL3Q4VX76 610 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 FAM45BPQ6NSW5 357 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 OTOAQ7RTW8 1153 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 ZNF547Q8IVP9 402 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 FAM46DQ8NEK8 389 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 FAM45AQ8TCE6 357 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 ELMO1Q92556 727 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 KCNJ9Q92806 393 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 TMEM159Q96B96 161 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 VPS39Q96JC1 886 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 TXLNGYQ9BZA5 131 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 RHOJQ9H4E5 214 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 STN1Q9H668 368 aaKnown RBP19.74■□□□□ 0.75
USP53-203ENST00000507597 ARGLU1Q9NWB6 273 aaPredicted RBP19.74■□□□□ 0.75
USP53-203ENST00000507597 TAS2R13Q9NYV9 303 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 RABGEF1Q9UJ41 708 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 PRKAB1Q9Y478 270 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 CACNA1EQ15878 2313 aa19.74■□□□□ 0.75
USP53-203ENST00000507597 CDX4O14627 284 aaPredicted RBP19.73■□□□□ 0.75
USP53-203ENST00000507597 SDC3O75056 442 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 INHBAP08476 426 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 PBLDP30039 288 aaPredicted RBP19.73■□□□□ 0.75
USP53-203ENST00000507597 MSH2P43246 934 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 SERPINB9P50453 376 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 LIMK1P53667 647 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 IL9RQ01113 521 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 UAP1L1Q3KQV9 507 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 PLA2G4EQ3MJ16 856 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 CNSTQ6PJW8 725 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 CFAP206Q8IYR0 622 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 MYRIPQ8NFW9 859 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 AENQ8WTP8 325 aaKnown RBP19.73■□□□□ 0.75
USP53-203ENST00000507597 AARSD1Q9BTE6 412 aaKnown RBP19.73■□□□□ 0.75
USP53-203ENST00000507597 TCEAL2Q9H3H9 227 aaPredicted RBP19.73■□□□□ 0.75
USP53-203ENST00000507597 DPEP2Q9H4A9 486 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 IL21RQ9HBE5 538 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 PNMA8BQ9ULN7 279 aaPredicted RBP19.73■□□□□ 0.75
USP53-203ENST00000507597 KCNK6Q9Y257 313 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 DNAJC16Q9Y2G8 782 aa19.73■□□□□ 0.75
USP53-203ENST00000507597 EXOC1LA0A1B0GW35 172 aa19.72■□□□□ 0.75
USP53-203ENST00000507597 CCDC151A5D8V7 595 aa19.72■□□□□ 0.75
USP53-203ENST00000507597 IFRD1O00458 451 aaPredicted RBP19.72■□□□□ 0.75
USP53-203ENST00000507597 YY2O15391 372 aa19.72■□□□□ 0.75
USP53-203ENST00000507597 CD9P21926 228 aa19.72■□□□□ 0.75
USP53-203ENST00000507597 CNTFP26441 200 aa19.72■□□□□ 0.75
USP53-203ENST00000507597 DUSP3P51452 185 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms