RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 DCBLD1Q8N8Z6 715 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 BBOF1Q8ND07 529 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 PATE1Q8WXA2 126 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 SH3KBP1Q96B97 665 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 GRAMD1AQ96CP6 724 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 MFSD3Q96ES6 412 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 SNF8Q96H20 258 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 SIGLEC10Q96LC7 697 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 DEPDC7Q96QD5 511 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 TRIM51Q9BSJ1 452 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 CCM2Q9BSQ5 444 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 LRRN3Q9H3W5 708 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 SARS2Q9NP81 518 aaKnown RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 PRDM8Q9NQV8 689 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 ACSL5Q9ULC5 683 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 PDZK1P1A8MUH7 402 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 EFCAB8A8MWE9 144 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 PFDN6O15212 129 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 PPM1DO15297 605 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 USP1O94782 785 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 SEC31AO94979 1220 aaKnown RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 VAPBO95292 243 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 FTH1P02794 183 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 OR56A5P0C7T3 313 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 SPINK2P20155 84 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 ARNTP27540 789 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 HALP42357 657 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 ARCN1P48444 511 aaKnown RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 UBE2IP63279 158 aaKnown RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 CCL7P80098 99 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 HHEXQ03014 270 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 SPIDRQ14159 915 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 CLPPQ16740 277 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 ANKRD20A4Q4UJ75 823 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 MRNIPQ6NTE8 343 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 CES3Q6UWW8 571 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 RBM44Q6ZP01 1051 aaKnown RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 SPRED1Q7Z699 444 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 SDCCAG8Q86SQ7 713 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 CLDN19Q8N6F1 224 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 GPR150Q8NGU9 434 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 HM13Q8TCT9 377 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 ZNF592Q92610 1267 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 CCDC97Q96F63 343 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 STAMBPL1Q96FJ0 436 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 GFM1Q96RP9 751 aaKnown RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 SLC38A3Q99624 504 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 ERP44Q9BS26 406 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 NAT9Q9BTE0 207 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-206ENST00000439717 UCK1Q9HA47 277 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 CPNE7Q9UBL6 633 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 MAD1L1Q9Y6D9 718 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 RPS6KL1Q9Y6S9 549 aa11.6□□□□□ -0.55
HSPG2-206ENST00000439717 TRBV23OR9-2A0A075B6M9 112 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 TMX2-CTNND1H3BSU7 103 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 RAD51CO43502 376 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 TTC4O95801 387 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 RPLP0P05388 317 aaKnown RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 POLBP06746 335 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 BRAFP15056 766 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 RPL10P27635 214 aaKnown RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 PBLDP30039 288 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 ITGA8P53708 1063 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 DRG2P55039 364 aaKnown RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 GPLD1P80108 840 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 DHX9Q08211 1270 aaKnown RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 TARDBPQ13148 414 aaKnown RBP eCLIP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 SQSTM1Q13501 440 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 NFE2L1Q14494 772 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 SEMA3AQ14563 771 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 SEPT7Q16181 437 aaKnown RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 RNF187Q5TA31 235 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 ZNF449Q6P9G9 518 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 FAM83HQ6ZRV2 1179 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 MICALCLQ6ZW33 695 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 LRRC6Q86X45 466 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 TRIM48Q8IWZ4 208 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 RBM12BQ8IXT5 1001 aaKnown RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 LMNTD2Q8IXW0 634 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 CFAP206Q8IYR0 622 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 PDIK1LQ8N165 341 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 AGGF1Q8N302 714 aaeCLIP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 Q8N9G6 341 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 KIF18AQ8NI77 898 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 ZNF669Q96BR6 464 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 LRRC39Q96DD0 335 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 FCRL3Q96P31 734 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 TCF12Q99081 682 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 TSSK1BQ9BXA7 367 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 TRIM31Q9BZY9 425 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 RAB17Q9H0T7 212 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 EPB41L1Q9H4G0 881 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 POT1Q9NUX5 634 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 SCHIP1Q9P0W5 487 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 WHRNQ9P202 907 aa11.59□□□□□ -0.55
HSPG2-206ENST00000439717 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 UTP11Q9Y3A2 253 aaKnown RBP11.59□□□□□ -0.55
HSPG2-206ENST00000439717 ZFC3H1O60293 1989 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms