RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 PTPRBP23467 1997 aa18.67■□□□□ 0.58
PDLIM7-204ENST00000393546 F8W8V4 182 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 QSOX1O00391 747 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 RPL10P27635 214 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 GPR3P46089 330 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 FASLGP48023 281 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 PRLHRP49683 370 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 CCL7P80098 99 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 SEPT7Q16181 437 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 WHAMMP3Q1A5X7 153 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 ANKRD20A4Q4UJ75 823 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 DNAJC21Q5F1R6 531 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 KIAA0930Q6ICG6 404 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 ABRAXAS1Q6UWZ7 409 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 PACS1Q6VY07 963 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 SDCCAG8Q86SQ7 713 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 CCNJLQ8IV13 435 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 CLDN19Q8N6F1 224 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 SH3KBP1Q96B97 665 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 CCM2Q9BSQ5 444 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 ACSL5Q9ULC5 683 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 CLCA2Q9UQC9 943 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 MSRB2Q9Y3D2 182 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 BPTFQ12830 3046 aa18.66■□□□□ 0.58
PDLIM7-204ENST00000393546 C17orf113A0A1B0GUU1 675 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 PPM1DO15297 605 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 RAD51CO43502 376 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 SEC31AO94979 1220 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 GSTM1P09488 218 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 OR56A5P0C7T3 313 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 XRCC1P18887 633 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 ALDH4A1P30038 563 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 HALP42357 657 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 TTPAP49638 278 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 ITGA8P53708 1063 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 DRG2P55039 364 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 CLDN6P56747 220 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 MRPS25P82663 173 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 GSTM4Q03013 218 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 HHEXQ03014 270 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 NFE2L1Q14494 772 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 CDCP2Q5VXM1 449 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 METRNLQ641Q3 311 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 MRNIPQ6NTE8 343 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 HIBCHQ6NVY1 386 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 CCNI2Q6ZMN8 369 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 ZNF438Q7Z4V0 828 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 TMEM135Q86UB9 458 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 CFAP206Q8IYR0 622 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 PDIK1LQ8N165 341 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 OTUD6BQ8N6M0 293 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 BBOF1Q8ND07 529 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 KIF18AQ8NI77 898 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 GFM1Q96RP9 751 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 ERP44Q9BS26 406 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 LRRN3Q9H3W5 708 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 SYNDIG1Q9H7V2 258 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 SARS2Q9NP81 518 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 SCHIP1Q9P0W5 487 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 CPNE7Q9UBL6 633 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 SNX24Q9Y343 169 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 RPS6KL1Q9Y6S9 549 aa18.65■□□□□ 0.58
PDLIM7-204ENST00000393546 FAM149AA5PLN7 773 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 PFDN6O15212 129 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 TCEA3O75764 348 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 RPLP0P05388 317 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 POLBP06746 335 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 OR1D5P58170 312 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 TARDBPQ13148 414 aaKnown RBP eCLIP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 SPIDRQ14159 915 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 SEMA3AQ14563 771 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 NR1D2Q14995 579 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 ZNF449Q6P9G9 518 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 RBM44Q6ZP01 1051 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 FAM83HQ6ZRV2 1179 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 SPRED1Q7Z699 444 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 TRIM48Q8IWZ4 208 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 DCBLD1Q8N8Z6 715 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 HM13Q8TCT9 377 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 ZNF669Q96BR6 464 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 STAMBPL1Q96FJ0 436 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 FCRL3Q96P31 734 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 DEPDC7Q96QD5 511 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 SLC38A3Q99624 504 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 MARCH4Q9P2E8 410 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 FAM8A1Q9UBU6 413 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 UNC13CQ8NB66 2214 aa18.64■□□□□ 0.57
PDLIM7-204ENST00000393546 PIKFYVEQ9Y2I7 2098 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 NTN3O00634 580 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 B4GAT1O43505 415 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 OR1I1O60431 355 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 NDUFS3O75489 264 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 USP1O94782 785 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 VIPP01282 170 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 FTH1P02794 183 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 BRAFP15056 766 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 ARNTP27540 789 aa18.63■□□□□ 0.57
PDLIM7-204ENST00000393546 SLC19A1P41440 591 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms