RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 DUS1LQ6P1R4 473 aaKnown RBP16.07■□□□□ 0.16
LTBR-201ENST00000228918 SFRP1Q8N474 314 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 EFHBQ8N7U6 833 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 GFM2Q969S9 779 aaKnown RBP16.07■□□□□ 0.16
LTBR-201ENST00000228918 SEPHS2Q99611 448 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 BPIFA1Q9NP55 256 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 NUDT4Q9NZJ9 180 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 MAGEL2Q9UJ55 1249 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 CDC14AQ9UNH5 594 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 V9GYQ6 96 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 SLC38A8A6NNN8 435 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 ANKRD66B4E2M5 251 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 SNAP29O95721 258 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 ATF6P18850 670 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 FLT3LGP49771 235 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 DUSP4Q13115 394 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 C1QTNF12Q5T7M4 302 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 DLEU7Q6UYE1 221 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 PRR23BQ6ZRT6 265 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 TTC30BQ8N4P2 665 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 VPS50Q96JG6 964 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 NSMCE2Q96MF7 247 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 CHID1Q9BWS9 393 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 ACTL8Q9H568 366 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 PIF1Q9H611 641 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 MARCH5Q9NX47 278 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 DNMT3LQ9UJW3 386 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 FNDC3AQ9Y2H6 1198 aaKnown RBP16.07■□□□□ 0.16
LTBR-201ENST00000228918 PCDHB3Q9Y5E6 796 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 COMMD10Q9Y6G5 202 aa16.07■□□□□ 0.16
LTBR-201ENST00000228918 ILVBLA1L0T0 632 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 E5RI56 91 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 H7C0S8 307 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 STX7O15400 261 aaKnown RBP16.06■□□□□ 0.16
LTBR-201ENST00000228918 CLDN11O75508 207 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 RHOCP08134 193 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 CDH1P12830 882 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 SLC11A2P49281 568 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 ADARB1P78563 741 aaKnown RBP16.06■□□□□ 0.16
LTBR-201ENST00000228918 TRAF2Q12933 501 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 RIMKLAQ8IXN7 391 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 TTLL2Q9BWV7 592 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 SOX17Q9H6I2 414 aaPredicted RBP16.06■□□□□ 0.16
LTBR-201ENST00000228918 SARS2Q9NP81 518 aaKnown RBP16.06■□□□□ 0.16
LTBR-201ENST00000228918 ESR1P03372 595 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 CAPN1P07384 714 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 ATP5C1P36542 298 aaKnown RBP16.06■□□□□ 0.16
LTBR-201ENST00000228918 GALK1P51570 392 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 SGSHP51688 502 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 CLCN7P51798 805 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 PMS2P3Q13401 168 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 SELPLGQ14242 412 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 PTPRRQ15256 657 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 AARS2Q5JTZ9 985 aaKnown RBP16.06■□□□□ 0.16
LTBR-201ENST00000228918 GLYATQ6IB77 296 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 TBPL2Q6SJ96 375 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 LYSMD3Q7Z3D4 306 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 DENND1CQ8IV53 801 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 RNF145Q96MT1 663 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 CDK5RAP1Q96SZ6 601 aaKnown RBP16.06■□□□□ 0.16
LTBR-201ENST00000228918 BDH2Q9BUT1 245 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 ADGRE3Q9BY15 652 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 P2RY12Q9H244 342 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 HIPK3Q9H422 1215 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 CDH7Q9ULB5 785 aa16.06■□□□□ 0.16
LTBR-201ENST00000228918 CBX4O00257 560 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 ARNTLO00327 626 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 LSM1O15116 133 aaKnown RBP16.05■□□□□ 0.16
LTBR-201ENST00000228918 TBC1D4O60343 1298 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 GJB5O95377 273 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 G6PDP11413 515 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 PTGER3P43115 390 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 RAB39AQ14964 217 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 PCBP2Q15366 365 aaKnown RBP eCLIP16.05■□□□□ 0.162e-7■■□□□ 12.6
LTBR-201ENST00000228918 CRY1Q16526 586 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 HABP4Q5JVS0 413 aaKnown RBP16.05■□□□□ 0.16
LTBR-201ENST00000228918 RTP2Q5QGT7 225 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 IL27RAQ6UWB1 636 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 ZNF554Q86TJ5 538 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 RALGPS2Q86X27 583 aaPredicted RBP16.05■□□□□ 0.16
LTBR-201ENST00000228918 DTWD1Q8N5C7 304 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 PCSK9Q8NBP7 692 aaKnown RBP16.05■□□□□ 0.16
LTBR-201ENST00000228918 LEMD2Q8NC56 503 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 ZNF420Q8TAQ5 688 aaPredicted RBP16.05■□□□□ 0.16
LTBR-201ENST00000228918 METTL6Q8TCB7 284 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 PPM1MQ96MI6 270 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 DOK1Q99704 481 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 YTHDF1Q9BYJ9 559 aaKnown RBP16.05■□□□□ 0.16
LTBR-201ENST00000228918 CXorf21Q9HAI6 301 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 NEUROG3Q9Y4Z2 214 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 PLXNA4Q9HCM2 1894 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 THSD7BQ9C0I4 1608 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 IQCF5A8MTL0 148 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 H0YAE9 185 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 ANKRD28O15084 1053 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 GPR39O43194 453 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 TULP3O75386 442 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 DCKP27707 260 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 TTKP33981 857 aa16.05■□□□□ 0.16
LTBR-201ENST00000228918 MAGEA10P43363 369 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms