RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Ist1Q9CX00 362 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ccdc3Q9D6Y1 273 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ptges3lQ9D9A7 131 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Kif13bA0A286YCV9 1847 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Dpy19l4A2AJQ3 722 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Tulp2P46686 562 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ddr1Q03146 911 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 CblbQ3TTA7 982 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Prom2Q3UUY6 835 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Xkr4Q5GH67 647 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 PnocQ64387 187 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Guk1Q64520 198 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ago1Q8CJG1 857 aaKnown RBP14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Iqsec1Q8R0S2 961 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 TriobpQ99KW3 2014 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gm5565A0A0G2JGB2 317 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gm281D3Z1Y0 860 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Tuba1bP05213 451 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 PlaaP27612 794 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Tmem165P52875 323 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Tuba1aP68369 451 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ezh1P70351 747 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Syndig1lQ3USQ7 237 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Plppr4Q7TME0 766 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Tcaf2Q921K8 919 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Asf1aQ9CQE6 204 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Obox6G3X9U1 347 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gm16427J3QN52 483 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ruvbl1P60122 456 aaKnown RBP14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Zswim5Q80TC6 1188 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Coq9Q8K1Z0 313 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ap1s2Q9DB50 160 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Vnn1Q9Z0K8 512 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Dhtkd1A2ATU0 921 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Vmn2r90E9PXJ8 863 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gm7970L7N271 213 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gm7980L7N471 213 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Stfa3P35173 103 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Arf3P61205 181 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Arf1P84078 181 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gjb4Q02738 266 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Prkd1Q62101 918 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Hmbox1Q8BJA3 419 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Tns4Q8BZ33 696 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Samd3Q8C4H2 520 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 SynpoQ8CC35 929 aaKnown RBP14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Mkl1Q8K4J6 964 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Hspb11Q9D6H2 143 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 AnkhQ9JHZ2 492 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Tsga10ipF7A1F0 157 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Pgk1P09411 417 aaKnown RBP14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Kir3dl1P83555 432 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Olfr681Q3SXH8 315 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Trmt2aQ8BNV1 574 aaKnown RBP14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Olfr679Q8VGV0 315 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Asb17Q8VHP9 295 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 PigkQ9CXY9 395 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Magel2Q9QZ04 1284 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Fbxo47A2A6H3 451 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Slc22a1O08966 556 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Cdh24Q6PFX6 781 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ces2eQ8BK48 559 aa14.31□□□□□ -0.12
Col7a1-201ENSMUST00000026740 KantrA0A1W2P7I0 76 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Npr1P18293 1057 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Cyp2a5P20852 494 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Klrb1aP27811 227 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Polr1eQ8K202 482 aaKnown RBP14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 DdoQ922Z0 341 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Det1Q9D0A0 550 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Q9D4W2 315 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 PtprtQ99M80 1454 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Zfp712E9PXJ4 705 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gm5145F8VQ88 278 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Cdc6O89033 562 aaKnown RBP14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Trnau1apQ80VC6 287 aaKnown RBP14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Psd4Q8BLR5 1005 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Pp2d1Q8BVT6 620 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Mfsd10Q9D2V8 456 aaKnown RBP14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Fam46aD3Z5S8 447 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 5430401F13RikE9Q328 175 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gm6619F6URP1 175 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gm3383J3QQ59 259 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ppp3caP63328 521 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Mpp1P70290 466 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Cyth4Q80YW0 393 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Cyp4f3Q99N16 524 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Glod5Q9D8I3 148 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Mpp5Q9JLB2 675 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Cyp4a31F8WGU9 509 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Olfr171G5E8J1 314 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Capza1P47753 286 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Tuba1cP68373 449 aaKnown RBP14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ctps2P70303 586 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Npy2rP97295 381 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Gk5Q8BX05 534 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Abcg4Q91WA9 646 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Lrch4Q921G6 680 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Hmgn3Q9DCB1 99 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Smad9Q9JIW5 430 aa14.3□□□□□ -0.12
Col7a1-201ENSMUST00000026740 Ltb4r2Q9JJL9 360 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms