Protein–RNA interactions for Protein: Q6PFX6

Cdh24, Cadherin-24, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh24Q6PFX6 Gm25239-201ENSMUST00000174915 86 ntBASIC38.36■■■■□ 3.73
Cdh24Q6PFX6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
Cdh24Q6PFX6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Cdh24Q6PFX6 Gm15042-201ENSMUST00000120212 883 ntBASIC33.34■■■□□ 2.93
Cdh24Q6PFX6 Gm24109-201ENSMUST00000175489 103 ntBASIC33.34■■■□□ 2.93
Cdh24Q6PFX6 Gm15045-201ENSMUST00000117359 883 ntBASIC32.57■■■□□ 2.8
Cdh24Q6PFX6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Cdh24Q6PFX6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Cdh24Q6PFX6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Cdh24Q6PFX6 Gm23366-201ENSMUST00000175022 89 ntBASIC32.04■■■□□ 2.72
Cdh24Q6PFX6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cdh24Q6PFX6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cdh24Q6PFX6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cdh24Q6PFX6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cdh24Q6PFX6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.11■■■□□ 2.57
Cdh24Q6PFX6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Cdh24Q6PFX6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.85■■■□□ 2.53
Cdh24Q6PFX6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.84■■■□□ 2.53
Cdh24Q6PFX6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cdh24Q6PFX6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Cdh24Q6PFX6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cdh24Q6PFX6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Cdh24Q6PFX6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Cdh24Q6PFX6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Cdh24Q6PFX6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.39■■■□□ 2.46
Cdh24Q6PFX6 Gm25238-201ENSMUST00000174914 89 ntBASIC30.32■■■□□ 2.44
Cdh24Q6PFX6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.27■■■□□ 2.44
Cdh24Q6PFX6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cdh24Q6PFX6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cdh24Q6PFX6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Cdh24Q6PFX6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
Cdh24Q6PFX6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Cdh24Q6PFX6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
Cdh24Q6PFX6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.79■■■□□ 2.36
Cdh24Q6PFX6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Cdh24Q6PFX6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Cdh24Q6PFX6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
Cdh24Q6PFX6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.49■■■□□ 2.31
Cdh24Q6PFX6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.47■■■□□ 2.31
Cdh24Q6PFX6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Cdh24Q6PFX6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Cdh24Q6PFX6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cdh24Q6PFX6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cdh24Q6PFX6 Gm27325-201ENSMUST00000175467 74 ntBASIC29.2■■■□□ 2.26
Cdh24Q6PFX6 Gm25262-201ENSMUST00000174934 133 ntBASIC29.18■■■□□ 2.26
Cdh24Q6PFX6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.16■■■□□ 2.26
Cdh24Q6PFX6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.11■■■□□ 2.25
Cdh24Q6PFX6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cdh24Q6PFX6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cdh24Q6PFX6 Psd-208ENSMUST00000224556 2034 ntBASIC28.87■■■□□ 2.21
Cdh24Q6PFX6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cdh24Q6PFX6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.84■■■□□ 2.21
Cdh24Q6PFX6 Rab21-202ENSMUST00000218831 843 ntBASIC28.82■■■□□ 2.2
Cdh24Q6PFX6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.75■■■□□ 2.19
Cdh24Q6PFX6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Cdh24Q6PFX6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Cdh24Q6PFX6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.63■■■□□ 2.17
Cdh24Q6PFX6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.62■■■□□ 2.17
Cdh24Q6PFX6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.6■■■□□ 2.17
Cdh24Q6PFX6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Cdh24Q6PFX6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Cdh24Q6PFX6 Gm26115-201ENSMUST00000175605 87 ntBASIC28.54■■■□□ 2.16
Cdh24Q6PFX6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Cdh24Q6PFX6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Cdh24Q6PFX6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cdh24Q6PFX6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Cdh24Q6PFX6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cdh24Q6PFX6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.36■■■□□ 2.13
Cdh24Q6PFX6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cdh24Q6PFX6 Gm8109-201ENSMUST00000194076 746 ntBASIC28.31■■■□□ 2.12
Cdh24Q6PFX6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.3■■■□□ 2.12
Cdh24Q6PFX6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.27■■■□□ 2.12
Cdh24Q6PFX6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.26■■■□□ 2.12
Cdh24Q6PFX6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cdh24Q6PFX6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cdh24Q6PFX6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.18■■■□□ 2.1
Cdh24Q6PFX6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cdh24Q6PFX6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.16■■■□□ 2.1
Cdh24Q6PFX6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cdh24Q6PFX6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cdh24Q6PFX6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Cdh24Q6PFX6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Cdh24Q6PFX6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Cdh24Q6PFX6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Cdh24Q6PFX6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Cdh24Q6PFX6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Cdh24Q6PFX6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.89■■■□□ 2.06
Cdh24Q6PFX6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Cdh24Q6PFX6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cdh24Q6PFX6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Cdh24Q6PFX6 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.82■■■□□ 2.04
Cdh24Q6PFX6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.78■■■□□ 2.04
Cdh24Q6PFX6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cdh24Q6PFX6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cdh24Q6PFX6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.7■■■□□ 2.03
Cdh24Q6PFX6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
Cdh24Q6PFX6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Cdh24Q6PFX6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cdh24Q6PFX6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cdh24Q6PFX6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.56■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms