RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 CDX2Q99626 313 aaPredicted RBP2.75□□□□□ -1.97
VAPA-208ENST00000584796 HAUS8Q9BT25 410 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 SMYD2Q9NRG4 433 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 HCFC1R1Q9NWW0 138 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 DERAQ9Y315 318 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 LAS1LQ9Y4W2 734 aaKnown RBP2.75□□□□□ -1.97
VAPA-208ENST00000584796 ZFHX4Q86UP3 3567 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 A0A0G2JMZ2 1700 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 KMT2EQ8IZD2 1858 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
VAPA-208ENST00000584796 PFASO15067 1338 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 CFAP47Q6ZTR5 3102 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 CCL15-CCL14A0A0B4J2E2 113 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 FAM90A7PA6NKC0 464 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 PMS2P5A8MQ11 134 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 FAM90A22PA8MWA6 464 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 FAM90A12PA8MX19 464 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 FAM90A23PA8MXZ1 464 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 ERVV-1B6SEH8 477 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 AKR1B15C9JRZ8 316 aaPredicted RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 EXTL3O43909 919 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 CEP104O60308 925 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 MTA2O94776 668 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 UFL1O94874 794 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 HSP90AA1P07900 732 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 PAX1P15863 534 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 ITGA2P17301 1181 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 S1PR1P21453 382 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 RPS12P25398 132 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 KRT2P35908 639 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 USP8P40818 1118 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 TMPOP42166 694 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 AARSP49588 968 aaKnown RBP eCLIP2.74□□□□□ -1.971e-7■■□□□ 14.2
VAPA-208ENST00000584796 CLDN2P57739 230 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 YWHAZP63104 245 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 CCL15Q16663 113 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 EDRF1Q3B7T1 1238 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 TMEM95Q3KNT9 176 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 CCDC38Q502W7 563 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 ANKRD54Q6NXT1 300 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 MOB3CQ70IA8 216 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 MTSS1LQ765P7 747 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 KMT5CQ86Y97 462 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 WDR63Q8IWG1 891 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 C1orf87Q8N0U7 546 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 SPICE1Q8N0Z3 855 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 PAF1Q8N7H5 531 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 ENAHQ8N8S7 591 aaPredicted RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 KLHDC9Q8NEP7 349 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 CNOT9Q92600 299 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 RND1Q92730 232 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 ABTB1Q969K4 478 aaPredicted RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 OPTNQ96CV9 577 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 FAM122AQ96E09 287 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 KXD1Q9BQD3 176 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 LRRC1Q9BTT6 524 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.74□□□□□ -1.973e-7■□□□□ 8.7
VAPA-208ENST00000584796 UTP14AQ9BVJ6 771 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 TEX13AQ9BXU3 409 aaPredicted RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 NYXQ9GZU5 481 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 ESRP2Q9H6T0 727 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 CNGB3Q9NQW8 809 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 SWAP70Q9UH65 585 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 TAGLN3Q9UI15 199 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 DNAJC16Q9Y2G8 782 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 GDAQ9Y2T3 454 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 DNAH14Q0VDD8 3507 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 MCM3APO60318 1980 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 SETXQ7Z333 2677 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 MAP1BP46821 2468 aaKnown RBP2.74□□□□□ -1.97
VAPA-208ENST00000584796 MYH2Q9UKX2 1941 aa2.74□□□□□ -1.97
VAPA-208ENST00000584796 ZFHX2Q9C0A1 2572 aaPredicted RBP2.73□□□□□ -1.97
VAPA-208ENST00000584796 PARP14Q460N5 1801 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 PABPN1LA6NDY0 278 aaKnown RBP2.73□□□□□ -1.97
VAPA-208ENST00000584796 PER2O15055 1255 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 BBOX1O75936 387 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 BAG4O95429 457 aaKnown RBP2.73□□□□□ -1.97
VAPA-208ENST00000584796 TUBBP07437 444 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 CLCNKAP51800 687 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 ACTR2P61160 394 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 TUBB4BP68371 445 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 AIMP1Q12904 312 aaKnown RBP2.73□□□□□ -1.97
VAPA-208ENST00000584796 FOXD4Q12950 439 aaPredicted RBP2.73□□□□□ -1.97
VAPA-208ENST00000584796 VGLL4Q14135 290 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 LRRC26Q2I0M4 334 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 LRIT3Q3SXY7 679 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 MMEL1Q495T6 779 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 ZNF876PQ49A33 203 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 CCNYL2Q5T2Q4 361 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 WDR78Q5VTH9 848 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 FAM109BQ6ICB4 259 aaPredicted RBP2.73□□□□□ -1.97
VAPA-208ENST00000584796 TRNP1Q6NT89 227 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 KIF6Q6ZMV9 814 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 ZNF497Q6ZNH5 498 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 PCGF5Q86SE9 256 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 TDHQ8IZJ6 230 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 TMEM57Q8N5G2 664 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 SCCPDHQ8NBX0 429 aa2.73□□□□□ -1.97
VAPA-208ENST00000584796 CADM4Q8NFZ8 388 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms