RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PCDHGB2Q9Y5G2 931 aa12.53□□□□□ -0.4
MKS1-206ENST00000577824 DNMT3AQ9Y6K1 912 aaPredicted RBP12.53□□□□□ -0.4
MKS1-206ENST00000577824 PI4KAP42356 2102 aa12.52□□□□□ -0.4
MKS1-206ENST00000577824 CFAP54Q96N23 3096 aa12.52□□□□□ -0.4
MKS1-206ENST00000577824 GON4LQ3T8J9 2241 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 KMOO15229 486 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 RIPK2O43353 540 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 GRID2O43424 1007 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 PCDHGA12O60330 932 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 OR1I1O60431 355 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 PIAS2O75928 621 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 TNFP01375 233 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 JUNDP17535 347 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 PHBP35232 272 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 CTSCP53634 463 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 PMS2P54278 862 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 GTF2H3Q13889 308 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 SF3A2Q15428 464 aaKnown RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 KYNUQ16719 465 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 ZNF648Q5T619 568 aaPredicted RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 XKR5Q6UX68 686 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 MARK2Q7KZI7 788 aaKnown RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 LDB1Q86U70 411 aaPredicted RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 FSTL5Q8N475 847 aaPredicted RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 MINDY1Q8N5J2 469 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 PNPLA1Q8N8W4 532 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 ZNF548Q8NEK5 533 aaPredicted RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 GPBAR1Q8TDU6 330 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 TSACCQ96A04 125 aaPredicted RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 DCUN1D1Q96GG9 259 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 EDEM2Q9BV94 578 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 TCEAL2Q9H3H9 227 aaPredicted RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 GAREM1Q9H706 876 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 CARS2Q9HA77 564 aaKnown RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 CYP4F12Q9HCS2 524 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 SMYD2Q9NRG4 433 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 IARS2Q9NSE4 1012 aaKnown RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 GULP1Q9UBP9 304 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 CORO1CQ9ULV4 474 aaPredicted RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 PCDHB1Q9Y5F3 818 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 ST14Q9Y5Y6 855 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 CSNK1G3Q9Y6M4 447 aa12.52□□□□□ -0.41
MKS1-206ENST00000577824 ZFHX2Q9C0A1 2572 aaPredicted RBP12.52□□□□□ -0.41
MKS1-206ENST00000577824 C17orf113A0A1B0GUU1 675 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 CDX4O14627 284 aaPredicted RBP12.51□□□□□ -0.41
MKS1-206ENST00000577824 KCNJ13O60928 360 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 NDUFS3O75489 264 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 ASMTLO95671 621 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 ESR1P03372 595 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 GABRB3P28472 473 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 PMLP29590 882 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 GNPDA1P46926 289 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 SLC14A1Q13336 389 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 CTBP1Q13363 440 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 NAA30Q147X3 362 aaPredicted RBP12.51□□□□□ -0.41
MKS1-206ENST00000577824 ZNF789Q5FWF6 425 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 CTSL3PQ5NE16 218 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 DBX2Q6ZNG2 339 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 NRROSQ86YC3 692 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 TRAPPC5Q8IUR0 188 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 HID1Q8IV36 788 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 MREGQ8N565 214 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 CLDN19Q8N6F1 224 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 OTUD6BQ8N6M0 293 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 SAP25Q8TEE9 199 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 FBF1Q8TES7 1133 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 CDKL2Q92772 493 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 SLC13A1Q9BZW2 595 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 CLPBQ9H078 707 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 VPS37BQ9H9H4 285 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 IL21RQ9HBE5 538 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 SLC17A6Q9P2U8 582 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 SPASTQ9UBP0 616 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 GNPTGQ9UJJ9 305 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 PSAT1Q9Y617 370 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 COMMD10Q9Y6G5 202 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 PRSS21Q9Y6M0 314 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 SDK1Q7Z5N4 2213 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 SPEGQ15772 3267 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 GVINP1Q7Z2Y8 2422 aa12.51□□□□□ -0.41
MKS1-206ENST00000577824 COL5A1P20908 1838 aaPredicted RBP12.51□□□□□ -0.41
MKS1-206ENST00000577824 A6NCN8 305 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 OR2AG2A6NM03 316 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 CXorf49A8MYA2 514 aaPredicted RBP12.5□□□□□ -0.41
MKS1-206ENST00000577824 LMO7DNF2Z398 122 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 F8W8V4 182 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 H3BMM5 538 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 AQP9O43315 295 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 AHSGP02765 367 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 FTH1P02794 183 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 OR56A5P0C7T3 313 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 GIMD1P0DJR0 217 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 CD9P21926 228 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 DGKAP23743 735 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 LIMK1P53667 647 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 CSE1LP55060 971 aaKnown RBP12.5□□□□□ -0.41
MKS1-206ENST00000577824 MPP1Q00013 466 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms