RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 EPHA6Q9UF33 1036 aa11.66□□□□□ -0.54
PTPN6-219ENST00000542848 KCND3Q9UK17 655 aa11.66□□□□□ -0.54
PTPN6-219ENST00000542848 DNAJC16Q9Y2G8 782 aa11.66□□□□□ -0.54
PTPN6-219ENST00000542848 UTP20O75691 2785 aaKnown RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 USP9YO00507 2555 aaPredicted RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 RASSF9O75901 435 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 NDUFA10O95299 355 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 MT-CYBP00156 380 aaPredicted RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 MT-ND3P03897 115 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 TPM1P09493 284 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 CCNYL3P0C7X3 344 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 ZNF28P17035 718 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 F8A1P23610 371 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 RPL10P27635 214 aaKnown RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 HMGCLP35914 325 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 DLSTP36957 453 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 CAPZBP47756 277 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 LEPRP48357 1165 aaKnown RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 SEPHS1P49903 392 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 SH3BP2P78314 561 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 TMEM115Q12893 351 aaPredicted RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 UBAP2LQ14157 1087 aaKnown RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 SEPT7Q16181 437 aaKnown RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 PCSK7Q16549 785 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 LACTB2Q53H82 288 aaPredicted RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 LRRC38Q5VT99 294 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 CACHD1Q5VU97 1274 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 BZW1Q7L1Q6 419 aaKnown RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 C11orf96Q7Z7L8 435 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 RASGRP3Q8IV61 690 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 GALNT6Q8NCL4 622 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 KLHL6Q8WZ60 621 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 CXorf40BQ96DE9 158 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 GLOD4Q9HC38 313 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 CROTQ9UKG9 612 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 TMPRSS11EQ9UL52 423 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 MRPS18BQ9Y676 258 aaKnown RBP11.65□□□□□ -0.54
PTPN6-219ENST00000542848 KCNMB2Q9Y691 235 aa11.65□□□□□ -0.54
PTPN6-219ENST00000542848 SPTBN1Q01082 2364 aaKnown RBP11.64□□□□□ -0.55
PTPN6-219ENST00000542848 USP9XQ93008 2570 aaPredicted RBP11.64□□□□□ -0.55
PTPN6-219ENST00000542848 A0A0A6YYK5 440 aaPredicted RBP11.64□□□□□ -0.55
PTPN6-219ENST00000542848 SSU72P8A0A1W2PR75 194 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 OR52A4PA6NMU1 304 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 AURKAO14965 403 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 MTX2O75431 263 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 SPAG6O75602 509 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 KIAA0754O94854 1291 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 SLC4A1P02730 911 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 NELFEP18615 380 aaKnown RBP11.64□□□□□ -0.55
PTPN6-219ENST00000542848 NR2C2P49116 596 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 KLRB1Q12918 225 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 GTF2H3Q13889 308 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 GPR18Q14330 331 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 IGFBP7Q16270 282 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 ATP13A5Q4VNC0 1218 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 KHDC1Q4VXA5 237 aaKnown RBP11.64□□□□□ -0.55
PTPN6-219ENST00000542848 ODF2Q5BJF6 829 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 FAM182AQ5T1J6 154 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 ATP1A1-AS1Q5TC04 95 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 ZDHHC20Q5W0Z9 365 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 NPNTQ6UXI9 565 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 PPP1R3BQ86XI6 285 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 RFX6Q8HWS3 928 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 VSTM4Q8IW00 320 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 OR8K1Q8NGG5 319 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 SPATA22Q8NHS9 363 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 RSC1A1Q92681 617 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 STAMBPL1Q96FJ0 436 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 TEKT5Q96M29 485 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 TTC25Q96NG3 672 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 FCRL4Q96PJ5 515 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 DEF6Q9H4E7 631 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 TRABDQ9H4I3 376 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 SEMA5BQ9P283 1151 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 ANKMY1Q9P2S6 941 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 PADI1Q9ULC6 663 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 PCDHGA6Q9Y5G7 932 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 SPO11Q9Y5K1 396 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 DNMT3AQ9Y6K1 912 aaPredicted RBP11.64□□□□□ -0.55
PTPN6-219ENST00000542848 ANKRD12Q6UB98 2062 aa11.64□□□□□ -0.55
PTPN6-219ENST00000542848 ESPL1Q14674 2120 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 LOC285095A0A1B0GVY8 99 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 CLEC18AA5D8T8 446 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 MKRN2OSH3BPM6 223 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 KIF1CO43896 1103 aaKnown RBP11.63□□□□□ -0.55
PTPN6-219ENST00000542848 AKR1B10O60218 316 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 PMPCBO75439 489 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 EPOP01588 193 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 PTPN3P26045 913 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 HALP42357 657 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 SLC1A1P43005 524 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 DRG2P55039 364 aaKnown RBP11.63□□□□□ -0.55
PTPN6-219ENST00000542848 DMPKQ09013 629 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 ERV3-1Q14264 604 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 TCTN3Q6NUS6 607 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 IRGCQ6NXR0 463 aa11.63□□□□□ -0.55
PTPN6-219ENST00000542848 KLHL35Q6PF15 583 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms