RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 TRIM3O75382 744 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 CD4P01730 458 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 PDGFAP04085 211 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 HMGN1P05114 100 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 TCF4P15884 667 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 TPSB2P20231 275 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 PSMA4P25789 261 aaKnown RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 ELK4P28324 431 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 YAP1P46937 504 aaKnown RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 RHAGQ02094 409 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 SLC25A11Q02978 314 aaKnown RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 MGAT3Q09327 533 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 EPS8Q12929 822 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 STARD3Q14849 445 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 SURF1Q15526 300 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 TPSAB1Q15661 275 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 PSMD5Q16401 504 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 KCNT1Q5JUK3 1230 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 FBXO47Q5MNV8 452 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 SYT6Q5T7P8 510 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 FBXO46Q6PJ61 603 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 DPH6Q7L8W6 267 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 CHST15Q7LFX5 561 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 PTAR1Q7Z6K3 402 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 CELF2-AS1Q8N7Q2 184 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 FAM71DQ8N9W8 422 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 CHDHQ8NE62 594 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 C18orf25Q96B23 403 aaPredicted RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 NXNL1Q96CM4 212 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 PDXPQ96GD0 296 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 SCLYQ96I15 445 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 HEXIM2Q96MH2 286 aaKnown RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 ZFP42Q96MM3 310 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 ADAM2Q99965 735 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 FEM1AQ9BSK4 669 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 ALOXE3Q9BYJ1 711 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 PLEKHA5Q9HAU0 1116 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 GOLGA2P5Q9HBQ8 144 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 DDX28Q9NUL7 540 aaKnown RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 KLHL11Q9NVR0 708 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 GLTPQ9NZD2 209 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 CCDC59Q9P031 241 aaKnown RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 ACTR3BQ9P1U1 418 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 OPTCQ9UBM4 332 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 CACNG4Q9UBN1 327 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 ATP6V1HQ9UI12 483 aa6.08□□□□□ -1.44
KDM3B-204ENST00000507996 DIMT1Q9UNQ2 313 aaKnown RBP6.08□□□□□ -1.44
KDM3B-204ENST00000507996 TCRBV5S2A0A599 114 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 TOR1BO14657 336 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 AXIN1O15169 862 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 TRIM13O60858 407 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 UGT2B17O75795 530 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 SRP72O76094 671 aaKnown RBP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 SNAP29O95721 258 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 CLIC3O95833 236 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 APOA1P02647 267 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 APOA4P06727 396 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 COL6A1P12109 1028 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 HOXB3P14651 431 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 ATF6P18850 670 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 EEF1B2P24534 225 aaKnown RBP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 GGT5P36269 586 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 MAGEA11P43364 429 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 CSRP3P50461 194 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 UGT2B15P54855 530 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 ZNF33BQ06732 778 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 PRKAA1Q13131 559 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 ORC1Q13415 861 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 NOMO1Q15155 1222 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 CARTPTQ16568 116 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 ZNF699Q32M78 642 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 C6orf141Q5SZD1 244 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 DEFB128Q7Z7B8 93 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 FNDC5Q8NAU1 212 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 SMG8Q8ND04 991 aaKnown RBP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 PJA1Q8NG27 643 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 HMGCLL1Q8TB92 370 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 DEPDC1BQ8WUY9 529 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 RPL3LQ92901 407 aaKnown RBP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 SNAPC3Q92966 411 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 PAWRQ96IZ0 340 aaKnown RBP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 MUS81Q96NY9 551 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 SECISBP2Q96T21 854 aaKnown RBP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 SDCBP2Q9H190 292 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 ERVMER34-1Q9H9K5 563 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 APOBEC3GQ9HC16 384 aaKnown RBP6.07□□□□□ -1.44
KDM3B-204ENST00000507996 TRIM39Q9HCM9 518 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 FAM105AQ9NUU6 356 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 ASNSD1Q9NWL6 643 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 MTMR10Q9NXD2 777 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 SFMBT1Q9UHJ3 866 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 PDE10AQ9Y233 779 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 PCDHGB2Q9Y5G2 931 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 RNF103-CHMP3A0A140T963 221 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 CCDC78A2IDD5 438 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 BBIP1A8MTZ0 92 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 XYLBO75191 536 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 FGF18O76093 207 aa6.07□□□□□ -1.44
KDM3B-204ENST00000507996 PRKD3O94806 890 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms