RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 RPN2P04844 631 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 ABHD2P08910 425 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CBSLP0DN79 551 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CKMT1AP12532 417 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 ENO3P13929 434 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CD59P13987 128 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 GLB1P16278 677 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CKMT2P17540 419 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 TPH1P17752 444 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 IDSP22304 550 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 AKT1P31749 480 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CBSP35520 551 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 HALP42357 657 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 LEPRP48357 1165 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 EPHA4P54764 986 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 PLTPP55058 493 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 DHX9Q08211 1270 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 MGAT5Q09328 741 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 TMED2Q15363 201 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 SF3A2Q15428 464 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 TTLL9Q3SXZ7 439 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 PRRT3Q5FWE3 981 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 ZRANB3Q5FWF4 1079 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 METRNLQ641Q3 311 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 WDR93Q6P2C0 686 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 TRMT10CQ7L0Y3 403 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 SERPINA9Q86WD7 417 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 HID1Q8IV36 788 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 NAXDQ8IW45 347 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 GDAP1Q8TB36 358 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 FBXO25Q8TCJ0 367 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 ASZ1Q8WWH4 475 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 OR1E3Q8WZA6 343 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 KCNJ9Q92806 393 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CERS2Q96G23 380 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 TRIM51Q9BSJ1 452 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 LRRC61Q9BV99 259 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 GTPBP2Q9BX10 602 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 LGR4Q9BXB1 951 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CCDC68Q9H2F9 335 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CARS2Q9HA77 564 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CYP4F12Q9HCS2 524 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 BPIFA1Q9NP55 256 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 SARS2Q9NP81 518 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 ZDHHC18Q9NUE0 388 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 POT1Q9NUX5 634 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 ATXN10Q9UBB4 475 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CD84Q9UIB8 345 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 APOBEC2Q9Y235 224 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 FNDC3AQ9Y2H6 1198 aaKnown RBP8.34□□□□□ -1.07
PDGFC-205ENST00000506880 SNX24Q9Y343 169 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 MAD1L1Q9Y6D9 718 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 CFAP54Q96N23 3096 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 BPTFQ12830 3046 aa8.34□□□□□ -1.07
PDGFC-205ENST00000506880 RP1P56715 2156 aa8.34□□□□□ -1.08
PDGFC-205ENST00000506880 EME2A4GXA9 379 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 C4orf47A7E2U8 309 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 MATN2O00339 956 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 DKK1O94907 266 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 VAPBO95292 243 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 FKBP9O95302 570 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 APOA4P06727 396 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 F3P13726 295 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 ZNF8P17098 575 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 XRCC1P18887 633 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 CNTFP26441 200 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 ARNTP27540 789 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 DEKP35659 375 aaKnown RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 CSE1LP55060 971 aaKnown RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 GPLD1P80108 840 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 GUCY2DQ02846 1103 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 PDIA2Q13087 525 aaKnown RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 RASA2Q15283 850 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 SHBQ15464 509 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 NR0B2Q15466 257 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 DBN1Q16643 649 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 PROX2Q3B8N5 592 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 UAP1L1Q3KQV9 507 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 BBS9Q3SYG4 887 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 PLEKHS1Q5SXH7 462 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 ALS2CLQ60I27 953 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 KLHL35Q6PF15 583 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 TAS2R42Q7RTR8 314 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 ZNF438Q7Z4V0 828 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 SLC9B2Q86UD5 537 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 KCNMB4Q86W47 210 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 TRAPPC5Q8IUR0 188 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 PALM2Q8IXS6 379 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 C2CD4AQ8NCU7 369 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 GPR156Q8NFN8 814 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 MAGEC3Q8TD91 643 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 ZNF669Q96BR6 464 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 MFSD3Q96ES6 412 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 PDXPQ96GD0 296 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 CPNE1Q99829 537 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 OR2AG1Q9H205 316 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 POPDC3Q9HBV1 291 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 EPB41L5Q9HCM4 733 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 SPATS2LQ9NUQ6 558 aaKnown RBP8.33□□□□□ -1.08
PDGFC-205ENST00000506880 FTSJ1Q9UET6 329 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms