RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 ARMCX2Q7L311 632 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 RBM23Q86U06 439 aaKnown RBP13.17□□□□□ -0.3
LETM1-203ENST00000505551 LRRTM3Q86VH5 581 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 RIMKLAQ8IXN7 391 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 TXNDC5Q8NBS9 432 aaKnown RBP13.17□□□□□ -0.3
LETM1-203ENST00000505551 ZFYVE19Q96K21 471 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
LETM1-203ENST00000505551 GPR78Q96P69 363 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 AIFM2Q9BRQ8 373 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 RPRD1BQ9NQG5 326 aaKnown RBP13.17□□□□□ -0.3
LETM1-203ENST00000505551 RNF19AQ9NV58 838 aa13.17□□□□□ -0.3
LETM1-203ENST00000505551 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.16□□□□□ -0.3
LETM1-203ENST00000505551 CCDC154A6NI56 674 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 METTL15A6NJ78 407 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 ZBBXA8MT70 800 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 MDM4O15151 490 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 TBC1D4O60343 1298 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 GNRH1P01148 92 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 PRKCBP05771 671 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.3
LETM1-203ENST00000505551 GTF2E2P29084 291 aaKnown RBP13.16□□□□□ -0.3
LETM1-203ENST00000505551 GGT5P36269 586 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 ADCYAP1R1P41586 468 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 CAPRIN1Q14444 709 aaKnown RBP13.16□□□□□ -0.3
LETM1-203ENST00000505551 TYSND1Q2T9J0 566 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 SYT6Q5T7P8 510 aaPredicted RBP13.16□□□□□ -0.3
LETM1-203ENST00000505551 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 NLGN4XQ8N0W4 816 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 ZNF566Q969W8 418 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 RIPOR3Q96MK2 946 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 FAM117AQ9C073 453 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 AMBRA1Q9C0C7 1298 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 DIABLOQ9NR28 239 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 STAP1Q9ULZ2 295 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 A0A0J9YYE9 177 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 NR5A2O00482 541 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 USP12O75317 370 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 VTNP04004 478 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 CAPN3P20807 821 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 HTR2BP41595 481 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 TPD52P55327 224 aaPredicted RBP13.16□□□□□ -0.3
LETM1-203ENST00000505551 EPS8Q12929 822 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 PLEKHG6Q3KR16 790 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 UGT3A2Q3SY77 523 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 EEF1DP3Q658K8 133 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 LARP4Q71RC2 724 aaKnown RBP eCLIP13.16□□□□□ -0.3
LETM1-203ENST00000505551 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
LETM1-203ENST00000505551 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
LETM1-203ENST00000505551 PLD3Q8IV08 490 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 PJA1Q8NG27 643 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 TMEM125Q96AQ2 219 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 LGALS12Q96DT0 336 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 CCDC90BQ9GZT6 254 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 FARSBQ9NSD9 589 aaKnown RBP13.16□□□□□ -0.3
LETM1-203ENST00000505551 DNMT3LQ9UJW3 386 aa13.16□□□□□ -0.3
LETM1-203ENST00000505551 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 UBXN8O00124 270 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 MEN1O00255 615 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 MSCO60682 206 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 SEMA3DO95025 777 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 TRIM16O95361 564 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 ALDOCP09972 364 aaKnown RBP13.15□□□□□ -0.3
LETM1-203ENST00000505551 YWHAQP27348 245 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 NDST1P52848 882 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 ISL1P61371 349 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 TAGLNQ01995 201 aaKnown RBP13.15□□□□□ -0.3
LETM1-203ENST00000505551 ZNF45Q02386 682 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 POU5F1BQ06416 359 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 CCL15Q16663 113 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
LETM1-203ENST00000505551 ARMC4Q5T2S8 1044 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 SCYL2Q6P3W7 929 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 CYHR1Q6ZMK1 362 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 RTL10Q7L3V2 364 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 CLEC4FQ8N1N0 589 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 TMBIM1Q969X1 311 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 LRRC58Q96CX6 371 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 LTB4R2Q9NPC1 389 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 ITM2CQ9NQX7 267 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 A3GALT2U3KPV4 340 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 DNAJC25-GNG10A0A024R161 153 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 GLTPD2A6NH11 291 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 C12orf71A8MTZ7 269 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 PTGES3LE9PB15 166 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 DPYSL4O14531 572 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 APOA1P02647 267 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 NCK1P16333 377 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 CD6P30203 668 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 PIGAP37287 484 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 PGGT1BP53609 377 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 DEFA1P59665 94 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 DEFA3P59666 94 aa13.15□□□□□ -0.3
LETM1-203ENST00000505551 PRKCDQ05655 676 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms