RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 P2RY12Q9H244 342 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 DNMT3AQ9Y6K1 912 aaPredicted RBP21.46■■□□□ 1.03
C9orf3-222ENST00000496567 VPS13AQ96RL7 3174 aa21.46■■□□□ 1.03
C9orf3-222ENST00000496567 H3BM21 787 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 H3BMM5 538 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 ARHGAP33O14559 1287 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 LRP3O75074 770 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 PIAS1O75925 651 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 FUCA1P04066 466 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 NME1P15531 152 aaKnown RBP21.45■■□□□ 1.02
C9orf3-222ENST00000496567 CTSCP53634 463 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 CSE1LP55060 971 aaKnown RBP21.45■■□□□ 1.02
C9orf3-222ENST00000496567 CCDC6Q16204 474 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 UAP1Q16222 522 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-222ENST00000496567 PYCR3Q53H96 274 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 PTRHD1Q6GMV3 140 aaKnown RBP21.45■■□□□ 1.02
C9orf3-222ENST00000496567 PHACTR4Q8IZ21 702 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 OR2M4Q96R27 311 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 ARGLU1Q9NWB6 273 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-222ENST00000496567 PNMA8BQ9ULN7 279 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-222ENST00000496567 CORO1CQ9ULV4 474 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-222ENST00000496567 PSAT1Q9Y617 370 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 COMMD10Q9Y6G5 202 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 PRSS21Q9Y6M0 314 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 CACNA1EQ15878 2313 aa21.45■■□□□ 1.02
C9orf3-222ENST00000496567 EXOC1LA0A1B0GW35 172 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 ZNF806P0C7X5 589 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 JUNDP17535 347 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 GABRB3P28472 473 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 FMO4P31512 558 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 GP5P40197 560 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 ARRB1P49407 418 aaPredicted RBP21.44■■□□□ 1.02
C9orf3-222ENST00000496567 PRLHRP49683 370 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 HNRNPKP61978 463 aaKnown RBP eCLIP21.44■■□□□ 1.02
C9orf3-222ENST00000496567 IRX4P78413 519 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 ZNF542PQ5EBM4 170 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 CNSTQ6PJW8 725 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 CRTC3Q6UUV7 619 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 BIRC8Q96P09 236 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 ELF4Q99607 663 aaPredicted RBP21.44■■□□□ 1.02
C9orf3-222ENST00000496567 TSSK1BQ9BXA7 367 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 TRNAU1APQ9NX07 287 aaKnown RBP21.44■■□□□ 1.02
C9orf3-222ENST00000496567 APOBEC3BQ9UH17 382 aaKnown RBP21.44■■□□□ 1.02
C9orf3-222ENST00000496567 GPSM3Q9Y4H4 160 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 IKBKGQ9Y6K9 419 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 DMDP11532 3685 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 KLHL33A6NCF5 533 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 DYNC1I1O14576 645 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 SGTAO43765 313 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 CER1O95813 267 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 FTH1P02794 183 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 GSTM1P09488 218 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 CTSEP14091 401 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 PKMP14618 531 aaKnown RBP21.44■■□□□ 1.02
C9orf3-222ENST00000496567 GSTM4Q03013 218 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 EFTUD2Q15029 972 aaKnown RBP eCLIP21.44■■□□□ 1.027e-9■■■■□ 19.9
C9orf3-222ENST00000496567 ZNF423Q2M1K9 1284 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 GRTP1Q5TC63 336 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 KCTD16Q68DU8 428 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 ZNF547Q8IVP9 402 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 LINC00615Q96LM1 132 aaPredicted RBP21.44■■□□□ 1.02
C9orf3-222ENST00000496567 SMOC1Q9H4F8 434 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 KLF15Q9UIH9 416 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 PRKAB1Q9Y478 270 aa21.44■■□□□ 1.02
C9orf3-222ENST00000496567 TP53BP1Q12888 1972 aaPredicted RBP21.43■■□□□ 1.02
C9orf3-222ENST00000496567 KCNJ13O60928 360 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 F7P08709 466 aaPredicted RBP21.43■■□□□ 1.02
C9orf3-222ENST00000496567 SPRP35270 261 aaPredicted RBP21.43■■□□□ 1.02
C9orf3-222ENST00000496567 RXRGP48443 463 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 LRP8Q14114 963 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 HLA-BQ31612 363 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 CHST15Q7LFX5 561 aaPredicted RBP21.43■■□□□ 1.02
C9orf3-222ENST00000496567 ZC3HC1Q86WB0 502 aaKnown RBP21.43■■□□□ 1.02
C9orf3-222ENST00000496567 NAT14Q8WUY8 206 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 PANX3Q96QZ0 392 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 RHOJQ9H4E5 214 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 FSCN3Q9NQT6 498 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 FETUBQ9UGM5 382 aa21.43■■□□□ 1.02
C9orf3-222ENST00000496567 MYO15AQ9UKN7 3530 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 LRP4O75096 1905 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 YKT6O15498 198 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 POP7O75817 140 aaKnown RBP21.42■■□□□ 1.02
C9orf3-222ENST00000496567 INHBAP08476 426 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 ENGP17813 658 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 VCLP18206 1134 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 MSH2P43246 934 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 ATXN3P54252 364 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-222ENST00000496567 NHLH1Q02575 133 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 INSCQ1MX18 579 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 CTSL3PQ5NE16 218 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 PRAMEF14Q5SWL7 426 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 BEND6Q5SZJ8 279 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-222ENST00000496567 BEND7Q8N7W2 519 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-222ENST00000496567 SLC44A1Q8WWI5 657 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 PAFAH2Q99487 392 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 RBBP8Q99708 897 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 TIMM29Q9BSF4 260 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 CCM2Q9BSQ5 444 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 GAREM1Q9H706 876 aa21.42■■□□□ 1.02
C9orf3-222ENST00000496567 PPCSQ9HAB8 311 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms