RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 DUPD1Q68J44 220 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 RIOX2Q8IUF8 465 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 CHERPQ8IWX8 916 aaKnown RBP7.8□□□□□ -1.16
BRCA1-221ENST00000493795 CFAP206Q8IYR0 622 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 SLC22A15Q8IZD6 547 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 TMEM161BQ8NDZ6 487 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 KAT2AQ92830 837 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 MTMR8Q96EF0 704 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 ACAT2Q9BWD1 397 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 DEFB129Q9H1M3 183 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 COPS7AQ9UBW8 275 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 MALT1Q9UDY8 824 aa7.8□□□□□ -1.16
BRCA1-221ENST00000493795 RHPN2P1A8MT19 583 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 LIASO43766 372 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 UBXN7O94888 489 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SCELO95171 688 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CCR3P51677 355 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SCGB2B2Q4G0G5 96 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 FAM35AQ86V20 835 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TOMM5Q8N4H5 51 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ZMIZ2Q8NF64 920 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 IFT27Q9BW83 186 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 LYARQ9NX58 379 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 DDX3XO00571 662 aaKnown RBP eCLIP7.79□□□□□ -1.161e-8■■■□□ 17.6
BRCA1-221ENST00000493795 KERAO60938 352 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SASH3O75995 380 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 FGF1P05230 155 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ZSCAN5DPP0CG00 497 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CHAF1BQ13112 559 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 AUHQ13825 339 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SF1Q15637 639 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PRAMEF18Q5VWM3 479 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 HFE2Q6ZVN8 426 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TMPRSS11BQ86T26 416 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 COMTD1Q86VU5 262 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ECHDC2Q86YB7 292 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 FOXRED2Q8IWF2 684 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TIGD4Q8IY51 512 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 KLHL36Q8N4N3 616 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 GSTCDQ8NEC7 633 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 DNERQ8NFT8 737 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CPNE2Q96FN4 548 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 NEDD4LQ96PU5 975 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SEMA3CQ99985 751 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TMEM121BQ9BXQ6 578 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 UCK2Q9BZX2 261 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 C1orf109Q9NX04 203 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 COMMD3Q9UBI1 195 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PADI2Q9Y2J8 665 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PCDHB9Q9Y5E1 797 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 NOX1Q9Y5S8 564 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 NLRP1Q9C000 1473 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ATP7AQ04656 1500 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 LOC100509620A0A075B734 347 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 A0A0G2JMP0 313 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF99A8MXY4 864 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 I3L521 148 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SCGB2A1O75556 95 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 IPO13O94829 963 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TRUB2O95900 331 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF14P17017 642 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SP100P23497 879 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PIK3CBP42338 1070 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SLC1A2P43004 574 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ANTXR2P58335 489 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 C2orf80Q0P641 193 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 NAE1Q13564 534 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 DNASE1L3Q13609 305 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ZC3H12AQ5D1E8 599 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PITRM1Q5JRX3 1037 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CAND1Q86VP6 1230 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CLIP4Q8N3C7 705 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 OR4M2Q8NGB6 313 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 OVCA2Q8WZ82 227 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CIB1Q99828 191 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 IRF2BPLQ9H1B7 796 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 DPAGT1Q9H3H5 408 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TBCCD1Q9NVR7 557 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CYTH4Q9UIA0 394 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 AGO1Q9UL18 857 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PDE10AQ9Y233 779 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 COLEC10Q9Y6Z7 277 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ATP6AP2A0A1C7CYW4 349 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 OR6C70A6NIJ9 312 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SIGLEC16A6NMB1 481 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 FAM86B1E9PN63 330 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 H3BRB1 525 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PQBP1O60828 265 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 LYPLA1O75608 230 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ATP6AP2O75787 350 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 THEGLP0DJG4 465 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 EPCAMP16422 314 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CTPS1P17812 591 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 GADD45AP24522 165 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CMPK1P30085 196 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CLCN7P51798 805 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CAPZA1P52907 286 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 RAB15P59190 212 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 RIPPLY1Q0D2K3 151 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 DLG2Q15700 870 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms