RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 RDH12Q96NR8 316 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 RHOJQ9H4E5 214 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 CARS2Q9HA77 564 aaKnown RBP21.03■□□□□ 0.96
SDF4-206ENST00000478938 EML4Q9HC35 981 aaKnown RBP21.03■□□□□ 0.96
SDF4-206ENST00000478938 TMPRSS11EQ9UL52 423 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 KCNH4Q9UQ05 1017 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 COL6A1P12109 1028 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 B2MP61769 119 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 FADDQ13158 208 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 SOWAHCQ53LP3 525 aaPredicted RBP21.03■□□□□ 0.96
SDF4-206ENST00000478938 TMEM199Q8N511 208 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 MRPL57Q9BQC6 102 aaKnown RBP21.03■□□□□ 0.96
SDF4-206ENST00000478938 KCNN2Q9H2S1 579 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 GLTPQ9NZD2 209 aa21.03■□□□□ 0.96
SDF4-206ENST00000478938 MRPL11Q9Y3B7 192 aaKnown RBP21.03■□□□□ 0.96
SDF4-206ENST00000478938 BCKDKO14874 412 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 NMBRP28336 390 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 SDC4P31431 198 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 LIPAP38571 399 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 NR2C2P49116 596 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 DNAJB13P59910 316 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 IFRD2Q12894 506 aaPredicted RBP21.02■□□□□ 0.96
SDF4-206ENST00000478938 SMN1Q16637 294 aaKnown RBP21.02■□□□□ 0.96
SDF4-206ENST00000478938 PAGE3Q5JUK9 113 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 C15orf52Q6ZUT6 534 aaKnown RBP21.02■□□□□ 0.96
SDF4-206ENST00000478938 TMEM179Q6ZVK1 233 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 DCP1BQ8IZD4 617 aaKnown RBP21.02■□□□□ 0.96
SDF4-206ENST00000478938 ZNF567Q8N184 647 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 NPLOC4Q8TAT6 608 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 ZNF566Q969W8 418 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 CSPG4P5Q96PW8 444 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 TEX13BQ9BXU2 312 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 BFARQ9NZS9 450 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 A8MT66 165 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 MFSD11O43934 449 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 PSAPP07602 524 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 ITGA2P17301 1181 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 IL12RB1P42701 662 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 RGS7P49802 495 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 MAPK12P53778 367 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 RAB10P61026 200 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 PLEKHG6Q3KR16 790 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 JADE1Q6IE81 842 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 TMEM80Q96HE8 168 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 ZNF304Q9HCX3 659 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 UTS2RQ9UKP6 389 aa21.02■□□□□ 0.96
SDF4-206ENST00000478938 ADAMTSL1Q8N6G6 1762 aa21.02■□□□□ 0.95
SDF4-206ENST00000478938 ASPDHA6ND91 283 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 CLDN24A6NM45 220 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 AHSGP02765 367 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 PDGFAP04085 211 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 GADD45AP24522 165 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 FAPQ12884 760 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 TMEM132AQ24JP5 1023 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 SPANXN2Q5MJ10 180 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 BRSK2Q8IWQ3 736 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 AMER2Q8N7J2 671 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.01■□□□□ 0.953e-7■■■■□ 23.4
SDF4-206ENST00000478938 DUSP21Q9H596 190 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 PCDHB14Q9Y5E9 798 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 CITO14578 2027 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 TSPAN4O14817 238 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 RAP2AP10114 183 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 SLC26A3P40879 764 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 CERS5Q8N5B7 392 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 CCNYQ8ND76 341 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 ITFG1Q8TB96 612 aa21.01■□□□□ 0.95
SDF4-206ENST00000478938 KCTD15Q96SI1 283 aaPredicted RBP21.01■□□□□ 0.95
SDF4-206ENST00000478938 INTS7Q9NVH2 962 aaKnown RBP21.01■□□□□ 0.95
SDF4-206ENST00000478938 EIF3KQ9UBQ5 218 aaKnown RBP21.01■□□□□ 0.95
SDF4-206ENST00000478938 EEF2KO00418 725 aaKnown RBP21■□□□□ 0.95
SDF4-206ENST00000478938 MDM4O15151 490 aa21■□□□□ 0.95
SDF4-206ENST00000478938 CYP7B1O75881 506 aa21■□□□□ 0.95
SDF4-206ENST00000478938 RAD17O75943 681 aa21■□□□□ 0.95
SDF4-206ENST00000478938 UGT2B10P36537 528 aa21■□□□□ 0.95
SDF4-206ENST00000478938 DSTNP60981 165 aa21■□□□□ 0.95
SDF4-206ENST00000478938 FOXM1Q08050 763 aa21■□□□□ 0.95
SDF4-206ENST00000478938 BTBD16Q32M84 506 aa21■□□□□ 0.95
SDF4-206ENST00000478938 PRSS36Q5K4E3 855 aa21■□□□□ 0.95
SDF4-206ENST00000478938 SLC26A9Q7LBE3 791 aa21■□□□□ 0.95
SDF4-206ENST00000478938 PYROXD2Q8N2H3 581 aa21■□□□□ 0.95
SDF4-206ENST00000478938 ZNF540Q8NDQ6 660 aa21■□□□□ 0.95
SDF4-206ENST00000478938 ZMIZ2Q8NF64 920 aa21■□□□□ 0.95
SDF4-206ENST00000478938 TMEM143Q96AN5 459 aa21■□□□□ 0.95
SDF4-206ENST00000478938 ACOX2Q99424 681 aa21■□□□□ 0.95
SDF4-206ENST00000478938 NXF2Q9GZY0 626 aaKnown RBP21■□□□□ 0.95
SDF4-206ENST00000478938 KLHL20Q9Y2M5 609 aa21■□□□□ 0.95
SDF4-206ENST00000478938 OR2A25A4D2G3 310 aa21■□□□□ 0.95
SDF4-206ENST00000478938 LOC110117498-PIK3R3F6TDL0 507 aa21■□□□□ 0.95
SDF4-206ENST00000478938 MITFO75030 526 aaPredicted RBP21■□□□□ 0.95
SDF4-206ENST00000478938 CYBBP04839 570 aa21■□□□□ 0.95
SDF4-206ENST00000478938 CYP4B1P13584 511 aa21■□□□□ 0.95
SDF4-206ENST00000478938 GOT1P17174 413 aa21■□□□□ 0.95
SDF4-206ENST00000478938 SOX9P48436 509 aa21■□□□□ 0.95
SDF4-206ENST00000478938 NKX3-2P78367 333 aa21■□□□□ 0.95
SDF4-206ENST00000478938 CSHL1Q14406 222 aa21■□□□□ 0.95
SDF4-206ENST00000478938 DENND6AQ8IWF6 608 aa21■□□□□ 0.95
SDF4-206ENST00000478938 TBCBQ99426 244 aa21■□□□□ 0.95
SDF4-206ENST00000478938 XYLT2Q9H1B5 865 aa21■□□□□ 0.95
SDF4-206ENST00000478938 RAPGEFL1Q9UHV5 662 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms