RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CCR2P41597 374 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 RGS7P49802 495 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 AP3M2P53677 418 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 CSE1LP55060 971 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 POLR2FP61218 127 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TUBA4AP68366 448 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 UBXN1Q04323 297 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TWF1Q12792 350 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ELAVL2Q12926 359 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 PLD1Q13393 1074 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SNX1Q13596 522 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 RCN1Q15293 331 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TAF12Q16514 161 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 EXOC3L4Q17RC7 722 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TIGD6Q17RP2 521 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ERCC6LQ2NKX8 1250 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC14Q49A88 953 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TIGD2Q4W5G0 525 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ARHGAP15Q53QZ3 475 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 C2CD6Q53TS8 623 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC122Q5T0U0 273 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 STXBP5Q5T5C0 1151 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC8B1Q6J4K2 584 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 DENND1BQ6P3S1 775 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 MZT2AQ6P582 158 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 FOXR2Q6PJQ5 311 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SARM1Q6SZW1 724 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TMEM270Q6UE05 265 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ASCL5Q7RTU5 278 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 GPRIN1Q7Z2K8 1008 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 GRASPQ7Z6J2 395 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 PHLDB2Q86SQ0 1253 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 METTL23Q86XA0 190 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 CCAR2Q8N163 923 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ZBTB8BQ8NAP8 495 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 B3GALNT2Q8NCR0 500 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 PPHLN1Q8NEY8 458 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ZMIZ2Q8NF64 920 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ITFG1Q8TB96 612 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TBC1D15Q8TC07 691 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC20A1Q8WUM9 679 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TFAP2CQ92754 450 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ATOH1Q92858 354 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 PCED1BQ96HM7 432 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 KLHL32Q96NJ5 620 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SPAG5Q96R06 1193 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SMOQ99835 787 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 VKORC1Q9BQB6 163 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 BPIFA3Q9BQP9 254 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 CPPED1Q9BRF8 314 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 MED10Q9BTT4 135 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 PARD6BQ9BYG5 372 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 NAT10Q9H0A0 1025 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 S1PR5Q9H228 398 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SMOC2Q9H3U7 446 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 EBF2Q9HAK2 575 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 HEYLQ9NQ87 328 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ZSCAN32Q9NX65 697 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 C6orf203Q9P0P8 240 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 VPS18Q9P253 973 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 PDP2Q9P2J9 529 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ATXN10Q9UBB4 475 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 DNMT3BQ9UBC3 853 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ZMAT5Q9UDW3 170 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 FBXO9Q9UK97 447 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 FBXW11Q9UKB1 542 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 TBC1D30Q9Y2I9 924 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 USP15Q9Y4E8 981 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 YIPF1Q9Y548 306 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 KMT2EQ8IZD2 1858 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF638Q14966 1978 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 SPTBN2O15020 2390 aa4.89□□□□□ -1.63
ATPAF1-203ENST00000460928 GREB1Q4ZG55 1949 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 GOLGA6L10A0A0M3HER8 536 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 LOC102723971A0A1B0GUV8 181 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 PABPN1LA6NDY0 278 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 PRR23AA6NEV1 266 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 OR6C75A6NL08 312 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 AHRRA9YTQ3 701 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 F8VP50 259 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 H7C4K7 107 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 PRRG1O14668 218 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 STX10O60499 249 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 N4BP1O75113 896 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 TACC1O75410 805 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 MOSPD3O75425 235 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 GFPT2O94808 682 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 SERPINC1P01008 464 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 ITGA5P08648 1049 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 HAPLN1P10915 354 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CEBPBP17676 345 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CHRNB2P17787 502 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC6A2P23975 617 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 ACVR2AP27037 513 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 WNT3P56703 355 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 MAP3K7CLP57077 242 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 INCA1Q0VD86 236 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 GPR17Q13304 367 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 RIPK1Q13546 671 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms