RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ASB1Q9Y576 335 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 PCDHGC4Q9Y5F7 938 aa14.4□□□□□ -0.1
MSH5-201ENST00000375703 MANSC4A6NHS7 340 aaPredicted RBP14.39□□□□□ -0.11
MSH5-201ENST00000375703 SEPT4O43236 478 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 ACSL4O60488 711 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 ENO2P09104 434 aaPredicted RBP14.39□□□□□ -0.11
MSH5-201ENST00000375703 HRH2P25021 359 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 ZNF157P51786 506 aaPredicted RBP14.39□□□□□ -0.11
MSH5-201ENST00000375703 OR4D2P58180 307 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 PMS2P3Q13401 168 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 TBC1D25Q3MII6 688 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 ZNF513Q8N8E2 541 aaPredicted RBP14.39□□□□□ -0.11
MSH5-201ENST00000375703 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 OSCP1Q8WVF1 389 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.39□□□□□ -0.117e-6■■■■□ 23.5
MSH5-201ENST00000375703 CRISPLD1Q9H336 500 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 HIPK3Q9H422 1215 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 SOX17Q9H6I2 414 aaPredicted RBP14.39□□□□□ -0.11
MSH5-201ENST00000375703 PKD2L2Q9NZM6 624 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 CROCCQ5TZA2 2017 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 OR6C75A6NL08 312 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 E5RI56 91 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 KDELR3O43731 214 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 VARSP26640 1264 aaKnown RBP14.39□□□□□ -0.11
MSH5-201ENST00000375703 ERVPABLB-1P60509 514 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 CTBSQ01459 385 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 MTA1Q13330 715 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 PLCL1Q15111 1095 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 CTSL3PQ5NE16 218 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 CST9Q5W186 159 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 DHRS4L2Q6PKH6 230 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 TBPL2Q6SJ96 375 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 ZFAND4Q86XD8 727 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 CPNE9Q8IYJ1 553 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 LRRC43Q8N309 656 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 OR52B6Q8NGF0 335 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 LZICQ8WZA0 190 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 NSMCE2Q96MF7 247 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 DCUN1D5Q9BTE7 237 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 OSBPL6Q9BZF3 934 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 FAF1Q9UNN5 650 aaPredicted RBP14.39□□□□□ -0.11
MSH5-201ENST00000375703 PLXNA3P51805 1871 aa14.39□□□□□ -0.11
MSH5-201ENST00000375703 DYTNA2CJ06 578 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 RPS24P62847 133 aaKnown RBP14.38□□□□□ -0.11
MSH5-201ENST00000375703 TRIM32Q13049 653 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 MRPL58Q14197 206 aaKnown RBP14.38□□□□□ -0.11
MSH5-201ENST00000375703 TGFBIQ15582 683 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 TRIM71Q2Q1W2 868 aaKnown RBP14.38□□□□□ -0.11
MSH5-201ENST00000375703 C5orf22Q49AR2 442 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 EFHBQ8N7U6 833 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 METTL6Q8TCB7 284 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 CD200R1Q8TD46 325 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 ZNF382Q96SR6 550 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 TDRD1Q9BXT4 1180 aaKnown RBP14.38□□□□□ -0.11
MSH5-201ENST00000375703 RAI2Q9Y5P3 530 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 CEP350Q5VT06 3117 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 ANKRD66B4E2M5 251 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 STX7O15400 261 aaKnown RBP14.38□□□□□ -0.11
MSH5-201ENST00000375703 CR2P20023 1033 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 PSMA3P25788 255 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 TTKP33981 857 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 CDH4P55283 916 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 TMED1Q13445 227 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 OTUD3Q5T2D3 398 aaPredicted RBP14.38□□□□□ -0.11
MSH5-201ENST00000375703 RNF19BQ6ZMZ0 732 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 TAS2R42Q7RTR8 314 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 LYSMD3Q7Z3D4 306 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 SFRP1Q8N474 314 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 ISG20Q96AZ6 181 aaKnown RBP14.38□□□□□ -0.11
MSH5-201ENST00000375703 SPATA17Q96L03 361 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 PPM1MQ96MI6 270 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 GPR62Q9BZJ7 368 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 POLR1BQ9H9Y6 1135 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 TMEM45AQ9NWC5 275 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 ZNF639Q9UID6 485 aa14.38□□□□□ -0.11
MSH5-201ENST00000375703 AGO1Q9UL18 857 aaKnown RBP14.38□□□□□ -0.11
MSH5-201ENST00000375703 CD9P21926 228 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 CLCN4P51793 760 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 ADARB1P78563 741 aaKnown RBP14.37□□□□□ -0.11
MSH5-201ENST00000375703 DUSP4Q13115 394 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 GPR107Q5VW38 600 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 LETMD1Q6P1Q0 360 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 IL27RAQ6UWB1 636 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 DLEU7Q6UYE1 221 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 KCTD8Q6ZWB6 473 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 CROCCP3Q8IVE0 287 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 DPP10Q8N608 796 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 BPIFB1Q8TDL5 484 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 YTHDF1Q9BYJ9 559 aaKnown RBP14.37□□□□□ -0.11
MSH5-201ENST00000375703 PLGRKTQ9HBL7 147 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 PCDHB3Q9Y5E6 796 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 GMEB1Q9Y692 573 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 IQCF5A8MTL0 148 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 CBX4O00257 560 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 ALBP02768 609 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 CAPN1P07384 714 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 ZDHHC11BP0C7U3 371 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 ATP5C1P36542 298 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms