RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Lrrn4P59383 733 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Ankrd13bQ5F259 626 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Inpp4bQ6P1Y8 924 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Olfr1313Q7TQW8 311 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 NanogQ80Z64 305 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Tmem72Q8C3K5 275 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Adap2Q8R2V5 381 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Efhc2Q9D485 750 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Dnase1l1Q9D7J6 314 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Slc28a3Q9ERH8 703 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Drg2Q9QXB9 364 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Ptges3Q9R0Q7 160 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Gm16494E9Q2Z4 87 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 H2-Q1O19441 368 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Sap18O55128 153 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Slc2a7P0C6A1 513 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Pdcd5P56812 126 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Cldn11Q60771 207 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Jak2Q62120 1129 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mef2dQ63943 514 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Nr2e1Q64104 385 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mrps7Q80X85 242 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Sec13Q9D1M0 322 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Gtf2h2Q9JIB4 396 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Casz1Q9CWL2 1761 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Zfp809G3X9G7 402 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Cyp4a10O88833 509 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Gnpda1O88958 289 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 MaptP10637 733 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 GzmgP13366 248 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Vcam1P29533 739 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Rph3aP47708 681 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Npr3P70180 536 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Col28a1Q2UY11 1141 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Cpa4Q6P8K8 420 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Zbtb24Q80X44 710 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mrps35Q8BJZ4 320 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Znf436Q8BPP0 452 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mat1aQ91X83 396 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Trim3Q9R1R2 744 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 FarsbQ9WUA2 589 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Auts2A0A087WPF7 1261 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mup18A2BIM8 181 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Kng1O08677 661 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mup11P04938 181 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 PrlP06879 226 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 DhpsQ3TXU5 369 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 TceancQ3US16 359 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Gm21320Q4FZE8 181 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mfsd3Q5U419 412 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Vtcn1Q7TSP5 283 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Ubqln1Q8R317 582 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Ilf2Q9CXY6 390 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Scrg1O88745 98 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 CatP24270 527 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Traf6P70196 530 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mup20Q5FW60 181 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Grik5Q61626 979 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Cyp4b1Q64462 511 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Vps9d1Q8C190 649 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 PdgfcQ8CI19 345 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Paqr5Q9DCU0 330 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 VapbQ9QY76 243 aaKnown RBP12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Cdc42bpbQ7TT50 1713 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mapk12O08911 367 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Cdh1P09803 884 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Gja5Q01231 358 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Fads2p1Q0VAX3 487 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Gulp1Q8K2A1 304 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Zfp810Q99K45 461 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Slc12a9Q99MR3 914 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mapk11Q9WUI1 364 aa12.5□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 GabreA2AMW3 916 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Ttll11A4Q9F4 727 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Alox5P48999 674 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mfsd14aP70187 490 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Fdxacb1Q3UY23 622 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Lix1Q6P566 282 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Vmn1r219Q8R271 312 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Itm2cQ91VK4 269 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Kcne2Q9D808 123 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Cps1Q8C196 1500 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Phf11cB4XVP9 339 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Zbtb11G5E8B9 1050 aaKnown RBP12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Dusp8O09112 663 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 KeraO35367 351 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Pitpnm1O35954 1243 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Prom1O54990 867 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 HnrnpdQ60668 355 aaKnown RBP12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 IgflQ6B9Z0 140 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Olfr1346Q8VGH6 313 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 NifkQ91VE6 317 aaKnown RBP12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mapk8Q91Y86 384 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Arpc2Q9CVB6 300 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Gm4450E9Q007 373 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mcpt1P11034 246 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Hsd3b4Q61767 373 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Mapre3Q6PER3 281 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Spata33Q8C624 132 aa12.49□□□□□ -0.41
Ccdc88c-201ENSMUST00000068411 Zmiz2Q8CIE2 920 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms