RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Sh3pxd2aO89032 1124 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Guca1aP43081 202 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Atp5jP97450 108 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 H2-Q2Q4KN81 360 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 RasefQ5RI75 627 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zswim9Q6DI92 447 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Stmnd1Q6P3A1 279 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 SyncripQ7TMK9 623 aaKnown RBP10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Znf569Q80W31 679 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vac14Q80WQ2 782 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nmur2Q8BZ39 395 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pdcd2lQ8C5N5 364 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Lurap1lQ8K2P1 221 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hid1Q8R1F6 788 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr722Q8VFC8 308 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ddx1Q91VR5 740 aaKnown RBP10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cmc1Q9CPZ8 106 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Lgals2Q9CQW5 130 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fbxl20Q9CZV8 436 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 TrirQ9D735 173 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Dus2Q9D7B1 493 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Dpysl5Q9EQF6 564 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tor1aQ9ER39 333 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zfp811A0A0J9YU71 552 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm16427J3QN52 483 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Kpna3O35344 521 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fgf10O35565 209 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc22a2O70577 553 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 AurkcO88445 282 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cdh1P09803 884 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 JundP15066 341 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Drd4P51436 387 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tuba4aP68368 448 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Trpv5P69744 723 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Col28a1Q2UY11 1141 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Clec12aQ504P2 267 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pdcd4Q61823 469 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 DdnQ80TS7 710 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 PstkQ8BP74 359 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Stx16Q8BVI5 326 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Clptm1lQ8BXA5 539 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zbtb9Q8CDC7 459 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 GrpQ8R1I2 146 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fndc8Q9D2H8 321 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rnft1Q9DCN7 395 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hipk3Q9ERH7 1192 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc7a8Q9QXW9 531 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Apc2Q9Z1K7 2274 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pcsk6F6XJP7 959 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Asna1O54984 348 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tbx1P70323 479 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hsdl2Q2TPA8 490 aaKnown RBP10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pacs2Q3V3Q7 862 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 PapolgQ6PCL9 739 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr1355Q7TQU9 310 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Psmd11Q8BG32 422 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 4932414N04RikQ8CEQ9 752 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slco4a1Q8K078 723 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Chchd6Q91VN4 273 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 PrkxQ922R0 355 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Lactb2Q99KR3 288 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc24a3Q99PD7 645 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Sike1Q9CPR7 207 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Wdr55Q9CX97 388 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Padi4Q9Z183 666 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Umodl1Q5DID3 1319 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm13040A2A8C4 496 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Man1b1A2AJ15 658 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vmn1r2A2AMT6 306 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm13119B1ARV5 481 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 A530032D15RikE9Q422 215 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ppp3cbP48453 525 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 CartptP56388 129 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 SirpaP97797 513 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 HecaQ3V1N5 544 aaKnown RBP10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Adora2aQ60613 410 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc6a4Q60857 630 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pnpla8Q8K1N1 776 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Treml1Q8K558 317 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vmn1r206Q8R277 312 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Trappc5Q9CQA1 188 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Snrpb2Q9CQI7 225 aaKnown RBP10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Capn10Q9ESK3 666 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rnf11Q9QYK7 154 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Spint1Q9R097 507 aa10.78□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm7682A0A0J9YUM1 481 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Lcn5A2AJB7 192 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Cldn24D3YXJ9 220 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Zfp963D3Z2T8 383 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 P01740 135 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Alox12eP55249 662 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Zmym5Q3U2E2 627 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Myo1dQ5SYD0 1006 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Satb1Q60611 764 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Flot2Q60634 428 aaKnown RBP10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Cd6Q61003 665 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Cpsf6Q6NVF9 551 aaKnown RBP10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 WtipQ7TQJ8 398 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Dnajc16Q80TN4 772 aa10.77□□□□□ -0.69
Msh3-201ENSMUST00000022220 Amigo2Q80ZD9 519 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms