RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SDCCAG8Q86SQ7 713 aaPredicted RBP6.66□□□□□ -1.34
UPF3B-205ENST00000636792 CROCCP2Q86T23 111 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 FAM124AQ86V42 546 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 KCNMB4Q86W47 210 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 SYT12Q8IV01 421 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 PALM2Q8IXS6 379 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 RBFAQ8N0V3 343 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 NXPE1Q8N323 547 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 RIBC1Q8N443 379 aaPredicted RBP6.66□□□□□ -1.34
UPF3B-205ENST00000636792 LRRN4CLQ8ND94 238 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 GPR26Q8NDV2 337 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 OR13C4Q8NGS5 318 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 OR4L1Q8NH43 312 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 AENQ8WTP8 325 aaKnown RBP6.66□□□□□ -1.34
UPF3B-205ENST00000636792 BTN2A2Q8WVV5 523 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 GLYATL1Q969I3 302 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 EID2BQ96D98 161 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 MFSD3Q96ES6 412 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 COX14Q96I36 57 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 HIC2Q96JB3 615 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 SERAC1Q96JX3 654 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 TSSK1BQ9BXA7 367 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 SPATA16Q9BXB7 569 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 TXLNGYQ9BZA5 131 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 CDC42EP4Q9H3Q1 356 aaKnown RBP6.66□□□□□ -1.34
UPF3B-205ENST00000636792 C6orf106Q9H6K1 298 aaPredicted RBP6.66□□□□□ -1.34
UPF3B-205ENST00000636792 CD93Q9NPY3 652 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 CHRAC1Q9NRG0 131 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 CATSPERZQ9NTU4 200 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 MOCS1Q9NZB8 636 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 ZFATQ9P243 1243 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 GGT7Q9UJ14 662 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 CHMP2BQ9UQN3 213 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 HCN4Q9Y3Q4 1203 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 PCDHB1Q9Y5F3 818 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 MUC3AQ02505 3323 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 PCDH15Q96QU1 1955 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 RALGAPA1Q6GYQ0 2036 aa6.66□□□□□ -1.34
UPF3B-205ENST00000636792 ABCA7Q8IZY2 2146 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 FAM47DPA6NHR8 397 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PROB1E7EW31 1015 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 EIF3FO00303 357 aaPredicted RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PLK4O00444 970 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 AURKAO14965 403 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 KPNA5O15131 536 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 FSBPO95073 299 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 VAPBO95292 243 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PAK4O96013 591 aaPredicted RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 GOT2P00505 430 aaKnown RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ESR1P03372 595 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 NUDT17P0C025 328 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 TPH1P17752 444 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 BCKDHBP21953 392 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 RPS3P23396 243 aaKnown RBP eCLIP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ACRV1P26436 265 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CNTFP26441 200 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ARNTP27540 789 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 NMBRP28336 390 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CD38P28907 300 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 NBL1P41271 181 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PTGER3P43115 390 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 MAPK9P45984 424 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 POLD2P49005 469 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PXNP49023 591 aaPredicted RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 THOP1P52888 689 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PMS2P54278 862 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CSE1LP55060 971 aaKnown RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 EIF3BP55884 814 aaKnown RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CDK3Q00526 305 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PLOD1Q02809 727 aaPredicted RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 DMWDQ09019 674 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 GTF2H3Q13889 308 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 SIM2Q14190 667 aaPredicted RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 FGL2Q14314 439 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 NFATC4Q14934 902 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 DUOXA1Q1HG43 343 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 LRRC8EQ6NSJ5 796 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 SLC23A3Q6PIS1 610 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 TSSK4Q6SA08 328 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 IL27RAQ6UWB1 636 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 MARK2Q7KZI7 788 aaKnown RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PARGQ86W56 976 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CCDC25Q86WR0 208 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 HEATR4Q86WZ0 1026 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CILP2Q8IUL8 1156 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 SLC41A1Q8IVJ1 513 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 AGGF1Q8N302 714 aaeCLIP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ZNF398Q8TD17 642 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 RLN3Q8WXF3 142 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 HDAC10Q969S8 669 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 LINC00615Q96LM1 132 aaPredicted RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PANX3Q96QZ0 392 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CYTH2Q99418 400 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 COPS8Q99627 209 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CPNE1Q99829 537 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CCDC77Q9BR77 488 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ORAI3Q9BRQ5 295 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 WDR83Q9BRX9 315 aaKnown RBP6.65□□□□□ -1.34
UPF3B-205ENST00000636792 APOOQ9BUR5 198 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 RIOK2Q9BVS4 552 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms