RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 DNTTIP1Q9H147 329 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 OR10A4Q9H209 315 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF696Q9H7X3 374 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 AKAP7Q9P0M2 348 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ACTR3BQ9P1U1 418 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 UBXN8O00124 270 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 DGKAP23743 735 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CBX5P45973 191 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PCDH1Q08174 1060 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TRMT10BQ6PF06 316 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CPNE8Q86YQ8 564 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 AQP1P29972 269 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 NFIAQ12857 509 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PMF1Q6P1K2 205 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 DEFB106AQ8N104 65 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 B3GNT4Q9C0J1 378 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 OLAHQ9NV23 265 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MKS1Q9NXB0 559 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CCNL1Q9UK58 526 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TRAV6A0A075B6T7 132 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ICMTO60725 284 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 WNT3AP56704 352 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 RAB39AQ14964 217 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PACRGLQ8N7B6 248 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TCF25Q9BQ70 676 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TBL1YQ9BQ87 522 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 C17orf62Q9BQA9 187 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF341Q9BYN7 854 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 COA1Q9GZY4 146 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 RPTORQ8N122 1335 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 UPK3BL1B0FP48 263 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 UPK3BL2E5RIL1 263 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 H0YAE9 185 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FPGTO14772 594 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 STAU1O95793 577 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 GRIA1P42261 906 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 RHDQ02161 417 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 KLHL26Q53HC5 615 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FBXO42Q6P3S6 717 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 KCNMB4Q86W47 210 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CHPFQ8IZ52 775 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 KLHL6Q8WZ60 621 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM80Q96HE8 168 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FEM1CQ96JP0 617 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CINPQ9BW66 212 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 C1orf21Q9H246 121 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 RIOX1Q9H6W3 641 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TAS2R9Q9NYW1 312 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FARP1Q9Y4F1 1045 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CSADQ9Y600 493 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TCRBV7S3A2A0A539 114 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MDM4O15151 490 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TUBB3Q13509 450 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 NFATC4Q14934 902 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SPPL2BQ8TCT7 592 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 GAB3Q8WWW8 586 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CNOT9Q92600 299 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 POLHQ9Y253 713 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SPIN1Q9Y657 262 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MYOCOSA0A1B0GUC4 107 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ANGPTL1O95841 491 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 GMPSP49915 693 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 WDSUB1Q8N9V3 476 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 LPCAT1Q8NF37 534 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 RPL4P36578 427 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 STARD3Q14849 445 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 UBAP2Q5T6F2 1119 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SNIP1Q8TAD8 396 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 DAGLAQ9Y4D2 1042 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MAGEA2P43356 314 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CAMK1Q14012 370 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 DSC3Q14574 896 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 HYIQ5T013 277 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF572Q7Z3I7 529 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PHF10Q8WUB8 498 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CCDC106Q9BWC9 280 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 KCNK13Q9HB14 408 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PCDHB7Q9Y5E2 793 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 CNTNAP2Q9UHC6 1331 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 WTIPA6NIX2 430 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MNDAP41218 407 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 NDST1P52848 882 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ATXN1P54253 815 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MANFP55145 182 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 NIPAL4Q0D2K0 466 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 SLC10A7Q0GE19 358 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 STILQ15468 1287 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FAM171BQ6P995 826 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ATAD1Q8NBU5 361 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FAM129BQ96TA1 746 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 MPZL2O60487 215 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 PRMT3O60678 531 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TPST2O60704 377 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 TFAP2AP05549 437 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 THEGLP0DJG4 465 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 DCDC1P59894 354 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FAM131BQ86XD5 332 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 ADGRF2Q8IZF7 708 aa3.66□□□□□ -1.82
ATXN3-248ENST00000558190 FAM98AQ8NCA5 519 aaKnown RBP3.66□□□□□ -1.82
ATXN3-248ENST00000558190 OR51V1Q9H2C8 321 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms