RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 DNMT3AQ9Y6K1 912 aaPredicted RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 BPTFQ12830 3046 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 A0A087WUV0 522 aaPredicted RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 CCDC151A5D8V7 595 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 PRMT5O14744 637 aaPredicted RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 YKT6O15498 198 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 RIPK2O43353 540 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 DNAJC6O75061 913 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 ACSL3O95573 720 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 S1PR4O95977 384 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 C1QAP02745 245 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 CSF2P04141 144 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 GSTM1P09488 218 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 NME1P15531 152 aaKnown RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 ZNF8P17098 575 aaPredicted RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 RPS3P23396 243 aaKnown RBP eCLIP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 SLC1A2P43004 574 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 RXRGP48443 463 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 HK3P52790 923 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 B4GALNT1Q00973 533 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 GSTM4Q03013 218 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 GRIK2Q13002 908 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 EIF2B5Q13144 721 aaKnown RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 ALG11Q2TAA5 492 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 BCL7AQ4VC05 210 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 CNPY4Q8N129 248 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 FBF1Q8TES7 1133 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 LPGAT1Q92604 370 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 CLPBQ9H078 707 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 NCDNQ9UBB6 729 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 CORO1CQ9ULV4 474 aaPredicted RBP16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 TMEM98Q9Y2Y6 226 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 COMMD10Q9Y6G5 202 aa16.24■□□□□ 0.19
SPTLC2-203ENST00000554901 VPS13AQ96RL7 3174 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 H3BM21 787 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 H3BMM5 538 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 ARHGAP33O14559 1287 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 KCNJ13O60928 360 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 MTX2O75431 263 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 TNFP01375 233 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 ESR1P03372 595 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 PI4KAP42356 2102 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 ARRB1P49407 418 aaPredicted RBP16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 HNRNPKP61978 463 aaKnown RBP eCLIP16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 BNC1Q01954 994 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 CTBP1Q13363 440 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 LRP8Q14114 963 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 ZNF423Q2M1K9 1284 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 DOK6Q6PKX4 331 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 MARK2Q7KZI7 788 aaKnown RBP16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 GALNT13Q8IUC8 556 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 DENND6AQ8IWF6 608 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 MREGQ8N565 214 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 RASGEF1AQ8N9B8 481 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 OR1E3Q8WZA6 343 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 ELF4Q99607 663 aaPredicted RBP16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 P2RY12Q9H244 342 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 ARFGAP3Q9NP61 516 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 TRNAU1APQ9NX07 287 aaKnown RBP16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 RABGEF1Q9UJ41 708 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 SUFUQ9UMX1 484 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 SNX11Q9Y5W9 270 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 OTOGLQ3ZCN5 2332 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 PLXNB3Q9ULL4 1909 aa16.23■□□□□ 0.19
SPTLC2-203ENST00000554901 KNL1Q8NG31 2342 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 PATE3B3GLJ2 98 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 KMOO15229 486 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 GRID2O43424 1007 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 CER1O95813 267 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 OR56A5P0C7T3 313 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 POLD2P49005 469 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 PRLHRP49683 370 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 NHLH1Q02575 133 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 KLHL38Q2WGJ6 581 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 KBTBD12Q3ZCT8 623 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 PYCR3Q53H96 274 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 LDB1Q86U70 411 aaPredicted RBP16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 LRRTM4Q86VH4 590 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 PHACTR4Q8IZ21 702 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 SDR16C5Q8N3Y7 309 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 TSACCQ96A04 125 aaPredicted RBP16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 PDXPQ96GD0 296 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 LINC00615Q96LM1 132 aaPredicted RBP16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 CPNE1Q99829 537 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 BOCQ9BWV1 1114 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 TSSK1BQ9BXA7 367 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 SLC13A1Q9BZW2 595 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 CARS2Q9HA77 564 aaKnown RBP16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 CYP4F12Q9HCS2 524 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 TXNDC16Q9P2K2 825 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 FETUBQ9UGM5 382 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 GNPTGQ9UJJ9 305 aa16.22■□□□□ 0.19
SPTLC2-203ENST00000554901 OR1I1O60431 355 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 FUCA1P04066 466 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 JUNDP17535 347 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 CD151P48509 253 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 CSE1LP55060 971 aaKnown RBP16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 IRX4P78413 519 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 SMAD1Q15797 465 aaKnown RBP16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 CSRP2Q16527 193 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms