RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 WDR37Q9Y2I8 494 aa10.34□□□□□ -0.75
RNF41-211ENST00000552656 PIKFYVEQ9Y2I7 2098 aa10.34□□□□□ -0.75
RNF41-211ENST00000552656 C1orf232A0A0U1RR37 186 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 MFSD11O43934 449 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 MTX2O75431 263 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 VIPP01282 170 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 MMP2P08253 660 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 CD48P09326 243 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 RARAP10276 462 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 TNFRSF8P28908 595 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 ZNF135P52742 658 aaPredicted RBP10.33□□□□□ -0.76
RNF41-211ENST00000552656 DRG2P55039 364 aaKnown RBP10.33□□□□□ -0.76
RNF41-211ENST00000552656 ITKQ08881 620 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 GPS2Q13227 327 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 QPCTQ16769 361 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 FKBP15Q5T1M5 1219 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 E4F1Q66K89 784 aaPredicted RBP10.33□□□□□ -0.76
RNF41-211ENST00000552656 SLC6A19Q695T7 634 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 IRGCQ6NXR0 463 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 SYVN1Q86TM6 617 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 SRRM1Q8IYB3 904 aaKnown RBP10.33□□□□□ -0.76
RNF41-211ENST00000552656 GPR26Q8NDV2 337 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 GPR150Q8NGU9 434 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 THAP4Q8WY91 577 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 MAML1Q92585 1016 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 SLC41A2Q96JW4 573 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 POLR1EQ9GZS1 481 aaKnown RBP10.33□□□□□ -0.76
RNF41-211ENST00000552656 PCDH9Q9HC56 1237 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 ACSS2Q9NR19 701 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.33□□□□□ -0.76
RNF41-211ENST00000552656 EPHA6Q9UF33 1036 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 TMPRSS11EQ9UL52 423 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 FER1L5A0AVI2 2057 aa10.33□□□□□ -0.76
RNF41-211ENST00000552656 MDC1Q14676 2089 aaKnown RBP10.33□□□□□ -0.76
RNF41-211ENST00000552656 APCP25054 2843 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 LGALS16A8MUM7 142 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 CBX6O95503 412 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 MT-ND3P03897 115 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 HLA-DQB2P05538 268 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 EBLN1P0CF75 366 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 ATP1A3P13637 1013 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 ZNF7P17097 686 aaPredicted RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 DESP17661 470 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 PCK1P35558 622 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 ARL4AP40617 200 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 TUBB3Q13509 450 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 NR6A1Q15406 480 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 PRAMEF17Q5VTA0 474 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 ALS2CLQ60I27 953 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 ABRAXAS1Q6UWZ7 409 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 ZNF517Q6ZMY9 492 aaPredicted RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 ZNF571Q7Z3V5 609 aaPredicted RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 C11orf96Q7Z7L8 435 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 TRIM48Q8IWZ4 208 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 RAVER1Q8IY67 606 aaKnown RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 NDUFAF2Q8N183 169 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 SNRNP40Q96DI7 357 aaKnown RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 ERGIC2Q96RQ1 377 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 MAP3K3Q99759 626 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 GPR87Q9BY21 358 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 RAB33BQ9H082 229 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 TRIM39Q9HCM9 518 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 POT1Q9NUX5 634 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 TRIM10Q9UDY6 481 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 LIMA1Q9UHB6 759 aaKnown RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 RARRES3Q9UL19 164 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 SRPK3Q9UPE1 567 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 FARSAQ9Y285 508 aaKnown RBP10.32□□□□□ -0.76
RNF41-211ENST00000552656 PDZD2O15018 2839 aa10.32□□□□□ -0.76
RNF41-211ENST00000552656 AKAP9Q99996 3911 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 PDZK1P1A8MUH7 402 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 DDX3XO00571 662 aaKnown RBP eCLIP10.31□□□□□ -0.764e-8■■■■■ 42.5
RNF41-211ENST00000552656 ZNF185O15231 689 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 SLC25A14O95258 325 aaPredicted RBP10.31□□□□□ -0.76
RNF41-211ENST00000552656 FTLP02792 175 aaPredicted RBP10.31□□□□□ -0.76
RNF41-211ENST00000552656 PRF1P14222 555 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 FERP16591 822 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 LPOP22079 712 aaPredicted RBP10.31□□□□□ -0.76
RNF41-211ENST00000552656 ITGA1P56199 1179 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 SLC25A11Q02978 314 aaKnown RBP10.31□□□□□ -0.76
RNF41-211ENST00000552656 GALNT2Q10471 571 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 GALNT3Q14435 633 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 CHRNA6Q15825 494 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 INSCQ1MX18 579 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 PLEKHN1Q494U1 663 aaPredicted RBP10.31□□□□□ -0.76
RNF41-211ENST00000552656 NCBP2-AS2Q69YL0 99 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 CPNE8Q86YQ8 564 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 AVL9Q8NBF6 648 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 SIDT2Q8NBJ9 832 aaKnown RBP10.31□□□□□ -0.76
RNF41-211ENST00000552656 NSMCE1Q8WV22 266 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 ZNF653Q96CK0 615 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 BTBD6Q96KE9 485 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 PPM1MQ96MI6 270 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 CHST8Q9H2A9 424 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 HSD3B7Q9H2F3 369 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 FGF21Q9NSA1 209 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 ASF1BQ9NVP2 202 aa10.31□□□□□ -0.76
RNF41-211ENST00000552656 RBM22Q9NW64 420 aaKnown RBP eCLIP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms