RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 MAGEE1Q9HCI5 957 aa3.78□□□□□ -1.8
CNOT2-216ENST00000548939 SAGE1Q9NXZ1 904 aa3.78□□□□□ -1.8
CNOT2-216ENST00000548939 IL1RAPL1Q9NZN1 696 aa3.78□□□□□ -1.8
CNOT2-216ENST00000548939 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.78□□□□□ -1.8
CNOT2-216ENST00000548939 KIAA1456Q9P272 454 aa3.78□□□□□ -1.8
CNOT2-216ENST00000548939 FEM1BQ9UK73 627 aa3.78□□□□□ -1.8
CNOT2-216ENST00000548939 FBXO9Q9UK97 447 aaPredicted RBP3.78□□□□□ -1.8
CNOT2-216ENST00000548939 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.78□□□□□ -1.8
CNOT2-216ENST00000548939 LTN1O94822 1766 aa3.78□□□□□ -1.8
CNOT2-216ENST00000548939 VCANP13611 3396 aa3.78□□□□□ -1.8
CNOT2-216ENST00000548939 CACNA1AO00555 2505 aa3.78□□□□□ -1.8
CNOT2-216ENST00000548939 USP42Q9H9J4 1324 aaKnown RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 RANBP2P49792 3224 aaKnown RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 VWA3AA6NCI4 1184 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 TMEM202A6NGA9 273 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 B9A039 149 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 DDX5P17844 614 aaKnown RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 MAOAP21397 527 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 ZNF10P21506 573 aaPredicted RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 BDKRB2P30411 391 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 EPS15P42566 896 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 MMP14P50281 582 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 GAGE5Q13069 117 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 GAGE6Q13070 117 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 TCTN1Q2MV58 587 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 SLC45A4Q5BKX6 768 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 FBXO46Q6PJ61 603 aaPredicted RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 FTSJ3Q8IY81 847 aaKnown RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 LYG1Q8N1E2 194 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 ZCCHC9Q8N567 271 aaKnown RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 VPS37AQ8NEZ2 397 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 EYA3Q99504 573 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 SH3GL2Q99962 352 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 PYGO2Q9BRQ0 406 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 MAP3K20Q9NYL2 800 aaKnown RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 DLGAP4Q9Y2H0 992 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 LOXL2Q9Y4K0 774 aa3.77□□□□□ -1.81
CNOT2-216ENST00000548939 GREB1LQ9C091 1923 aaPredicted RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 DICER1Q9UPY3 1922 aaKnown RBP3.77□□□□□ -1.81
CNOT2-216ENST00000548939 CENPJQ9HC77 1338 aaPredicted RBP3.76□□□□□ -1.81
CNOT2-216ENST00000548939 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 CRLF1O75462 422 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 CNPP09543 421 aaKnown RBP3.76□□□□□ -1.81
CNOT2-216ENST00000548939 CHRNB4P30926 498 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 METAP2P50579 478 aaKnown RBP eCLIP3.76□□□□□ -1.81
CNOT2-216ENST00000548939 LPAL2Q16609 132 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 ZNF667Q5HYK9 610 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 ANKRD45Q5TZF3 282 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 ATF7IPQ6VMQ6 1270 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 STXBP4Q6ZWJ1 553 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 ADGRG6Q86SQ4 1221 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 TADA2BQ86TJ2 420 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 SLC35F3Q8IY50 421 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 GPC2Q8N158 579 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 USP38Q8NB14 1042 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 SPPL3Q8TCT6 385 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 HCAR2Q8TDS4 363 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 TM9SF4Q92544 642 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 GLIS2Q9BZE0 524 aaPredicted RBP3.76□□□□□ -1.81
CNOT2-216ENST00000548939 BPIFA1Q9NP55 256 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 GPR108Q9NPR9 543 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 OGFRQ9NZT2 677 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 ZNF624Q9P2J8 865 aaPredicted RBP3.76□□□□□ -1.81
CNOT2-216ENST00000548939 TTC7AQ9ULT0 858 aaPredicted RBP3.76□□□□□ -1.81
CNOT2-216ENST00000548939 FAM96BQ9Y3D0 163 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 DAAM1Q9Y4D1 1078 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 PRSS21Q9Y6M0 314 aa3.76□□□□□ -1.81
CNOT2-216ENST00000548939 KIAA0100Q14667 2235 aaKnown RBP3.76□□□□□ -1.81
CNOT2-216ENST00000548939 TRPM7Q96QT4 1865 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 ITGB4P16144 1822 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 CD163L1Q9NR16 1453 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 HHLA1C9JL84 531 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 MT-CYBP00156 380 aaPredicted RBP3.75□□□□□ -1.81
CNOT2-216ENST00000548939 POU1F1P28069 291 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 TM4SF1P30408 202 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 HOXC9P31274 260 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 DCTP40126 519 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 CRKLP46109 303 aaKnown RBP3.75□□□□□ -1.81
CNOT2-216ENST00000548939 EFNA5P52803 228 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 ZNF234Q14588 700 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 METTL2BQ6P1Q9 378 aaKnown RBP3.75□□□□□ -1.81
CNOT2-216ENST00000548939 CPLX2Q6PUV4 134 aaKnown RBP3.75□□□□□ -1.81
CNOT2-216ENST00000548939 USP50Q70EL3 339 aaPredicted RBP3.75□□□□□ -1.81
CNOT2-216ENST00000548939 GTSCR1Q86UQ5 136 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 TMTC1Q8IUR5 882 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 SPATA6LQ8N4H0 392 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 ZBTB2Q8N680 514 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 DEFB123Q8N688 67 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 STPG4Q8N801 248 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 STAMBPL1Q96FJ0 436 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 SCRN2Q96FV2 425 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 METTL2AQ96IZ6 378 aaKnown RBP3.75□□□□□ -1.81
CNOT2-216ENST00000548939 LRR1Q96L50 414 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 COG8Q96MW5 612 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 ASCL2Q99929 193 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 DCTN5Q9BTE1 182 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 NDST4Q9H3R1 872 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 MMP25Q9NPA2 562 aa3.75□□□□□ -1.81
CNOT2-216ENST00000548939 LSM4Q9Y4Z0 139 aaKnown RBP3.75□□□□□ -1.81
CNOT2-216ENST00000548939 ADAMTSL1Q8N6G6 1762 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms