RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 GSTK1Q9Y2Q3 226 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 hCG_1809904A0A1W2PP81 198 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 A0A1W2PPE2 198 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 A0A1W2PR64 198 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 CIB4A0PJX0 185 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 PMS2P1A4D2B8 440 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 LRRN3E7EW58 273 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 AURKAO14965 403 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 PRAMEF2O60811 474 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 TGM2P21980 687 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 MAGEA12P43365 314 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 BRCC3P46736 316 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 TGM4P49221 684 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 DHPSP49366 369 aaPredicted RBP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 RBP5P82980 135 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 TGM3Q08188 693 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 IKBKEQ14164 716 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 AMZ1Q400G9 498 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 VPS26BQ4G0F5 336 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 SLC39A12Q504Y0 691 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 LGSNQ5TDP6 509 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 ATG9BQ674R7 924 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 KCTD8Q6ZWB6 473 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 ZNF410Q86VK4 478 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 ARHGAP12Q8IWW6 846 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 EMID1Q96A84 441 aaPredicted RBP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 PTERQ96BW5 349 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 ELP4Q96EB1 424 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 SEPT5Q99719 369 aaPredicted RBP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 KCTD14Q9BQ13 255 aaPredicted RBP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 WDR77Q9BQA1 342 aaPredicted RBP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 NAT9Q9BTE0 207 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 FUCA2Q9BTY2 467 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 ACE2Q9BYF1 805 aaPredicted RBP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 NEUROG2Q9H2A3 272 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 LRRN3Q9H3W5 708 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 GPN1Q9HCN4 374 aaPredicted RBP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 DTLQ9NZJ0 730 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 GSKIPQ9P0R6 139 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 APEX2Q9UBZ4 518 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 DNMT3LQ9UJW3 386 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 CYP8B1Q9UNU6 501 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 ZFR2Q9UPR6 939 aaKnown RBP6.88□□□□□ -1.31
LIN7C-202ENST00000524596 NDUFB9Q9Y6M9 179 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 SYNJ1O43426 1573 aa6.88□□□□□ -1.31
LIN7C-202ENST00000524596 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ZNF213O14771 459 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 MSH4O15457 936 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 CPB1P15086 417 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 FGFR4P22455 802 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 GTF2E2P29084 291 aaKnown RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 MPIP34949 423 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 TFAMQ00059 246 aaKnown RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 GCNT1Q02742 428 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SRSF11Q05519 484 aaKnown RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 GABPAQ06546 454 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SNTA1Q13424 505 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 PDK1Q15118 436 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SLC9A3R2Q15599 337 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 KIAA0319Q5VV43 1072 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 LIPJQ5W064 366 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 LPCAT4Q643R3 524 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 CDC73Q6P1J9 531 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 MTFR2Q6P444 385 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 HDDC3Q8N4P3 179 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ZNF454Q8N9F8 522 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 FBXL13Q8NEE6 735 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 TRMT10AQ8TBZ6 339 aaKnown RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ZNF507Q8TCN5 953 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 CREB3L1Q96BA8 519 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 NXPE2Q96DL1 559 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 OTUB1Q96FW1 271 aaPredicted RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SPON2Q9BUD6 331 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SPATA9Q9BWV2 254 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 RNF32Q9H0A6 362 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ALX4Q9H161 411 aaPredicted RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 GAL3ST2Q9H3Q3 398 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 MRPS30Q9NP92 439 aaKnown RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 NKX1-2Q9UD57 310 aaPredicted RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ZNF230Q9UIE0 474 aaPredicted RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ABT1Q9ULW3 272 aaKnown RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SMCO3A2RU48 225 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 POM121BA6NF01 834 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 CLCA1A8K7I4 914 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ADRB1P08588 477 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ARP10275 920 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SYN1P17600 705 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ECHS1P30084 290 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SSTR3P32745 418 aaPredicted RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 RPS19P39019 145 aaKnown RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ALDH1A3P47895 512 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SRP9P49458 86 aaKnown RBP6.87□□□□□ -1.31
LIN7C-202ENST00000524596 PRKAA2P54646 552 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 EPHA5P54756 1037 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 ASIC1P78348 528 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 SCN1BQ07699 218 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 MAP4K2Q12851 820 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 BNIP3Q12983 259 aa6.87□□□□□ -1.31
LIN7C-202ENST00000524596 GPS1Q13098 491 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms