RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SLAMF8Q9P0V8 285 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 TIMM22Q9Y584 194 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 CCDC162PA2VCL2 907 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 ARNTLO00327 626 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 IFRD1O00458 451 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-202ENST00000413219 TREHO43280 583 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 KPNA6O60684 536 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 HLA-DPA1P20036 260 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 JAK1P23458 1154 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 STC1P52823 247 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 MAPK10P53779 464 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 MLLT10P55197 1068 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 OXCT1P55809 520 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 RPS3AP61247 264 aaKnown RBP17.47■□□□□ 0.39
SDCBP-202ENST00000413219 ECT2LQ008S8 904 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 CHRNB3Q05901 458 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 PRKG2Q13237 762 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 SEMA3AQ14563 771 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 MSANTD2Q6P1R3 559 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 SYVN1Q86TM6 617 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 STK32CQ86UX6 486 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 MINDY2Q8NBR6 621 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 PDZD8Q8NEN9 1154 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 ITFG1Q8TB96 612 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 MUL1Q969V5 352 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 SERPINB11Q96P15 392 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 BCL7BQ9BQE9 202 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 MROQ9BYG7 248 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 SP110Q9HB58 689 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 PRDM5Q9NQX1 630 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-202ENST00000413219 TMEM248Q9NWD8 314 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 COMMD8Q9NX08 183 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 USE1Q9NZ43 259 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 USP22Q9UPT9 525 aa17.47■□□□□ 0.39
SDCBP-202ENST00000413219 CLDN25C9JDP6 229 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 KATNA1O75449 491 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 ECI2O75521 394 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 SOAT2O75908 522 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 MOCS2O96007 188 aaPredicted RBP17.46■□□□□ 0.39
SDCBP-202ENST00000413219 CYP11A1P05108 521 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 FGF1P05230 155 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 IL12AP29459 219 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 HALP42357 657 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 OCA2Q04671 838 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 RAD51Q06609 339 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 OXA1LQ15070 435 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 TRIM16LQ309B1 348 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 C6orf141Q5SZD1 244 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 IL31Q6EBC2 164 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 ZDHHC13Q8IUH4 622 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 PARP8Q8N3A8 854 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 DTWD1Q8N5C7 304 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 PJA1Q8NG27 643 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 OR4L1Q8NH43 312 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 SDCCAG3Q96C92 435 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 BTN2A3PQ96KV6 586 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 CCDC115Q96NT0 180 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 KLHL5Q96PQ7 755 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 GAD1Q99259 594 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 ADNPQ9H2P0 1102 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 TMEM165Q9HC07 324 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 ATAD3AQ9NVI7 634 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 PCTPQ9UKL6 214 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 MEIS3P2A8K0S8 358 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 TBC1D4O60343 1298 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 GGT1P19440 569 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 CASP2P42575 452 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 PSEN2P49810 448 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 MAPRE1Q15691 268 aaKnown RBP17.46■□□□□ 0.39
SDCBP-202ENST00000413219 PIK3R6Q5UE93 754 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 DLEU7Q6UYE1 221 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 SCD5Q86SK9 330 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 DPP9Q86TI2 863 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 ZNF683Q8IZ20 524 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 SVOPLQ8N434 492 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 CHDHQ8NE62 594 aaPredicted RBP17.46■□□□□ 0.39
SDCBP-202ENST00000413219 OR56A4Q8NGH8 313 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 PROKR1Q8TCW9 393 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 SH3YL1Q96HL8 342 aaPredicted RBP17.46■□□□□ 0.39
SDCBP-202ENST00000413219 TINF2Q9BSI4 451 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 UGT2B28Q9BY64 529 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 WDR12Q9GZL7 423 aaKnown RBP17.46■□□□□ 0.39
SDCBP-202ENST00000413219 TOR3AQ9H497 397 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 HMG20AQ9NP66 347 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 HEBP1Q9NRV9 189 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 ADARB2Q9NS39 739 aaKnown RBP17.46■□□□□ 0.39
SDCBP-202ENST00000413219 TMLHEQ9NVH6 421 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 FAM118AQ9NWS6 357 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 TAS2R13Q9NYV9 303 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 ENPP5Q9UJA9 477 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 PDE10AQ9Y233 779 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 V9GYQ6 96 aa17.46■□□□□ 0.39
SDCBP-202ENST00000413219 BPTFQ12830 3046 aa17.46■□□□□ 0.38
SDCBP-202ENST00000413219 HAS3O00219 553 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 RHOBTB1O94844 696 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 EPOP01588 193 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 UGT2B4P06133 528 aa17.45■□□□□ 0.38
SDCBP-202ENST00000413219 HAPLN1P10915 354 aaPredicted RBP17.45■□□□□ 0.38
SDCBP-202ENST00000413219 TCF3P15923 654 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms