RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 H0Y626 953 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 ERVH48-1M5A8F1 160 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 UBDO15205 165 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 MED7O43513 233 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 TULP3O75386 442 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 TRIM16O95361 564 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 DLGAP3O95886 979 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 ALPLP05186 524 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 GSTM1P09488 218 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 HOXB1P14653 301 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 JUNDP17535 347 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 TFE3P19532 575 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 ELK4P28324 431 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 GNPDA1P46926 289 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF143P52747 638 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 BCAR1P56945 870 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 IGBP1P78318 339 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 GRIK4Q16099 956 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 GEN1Q17RS7 908 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 STRADAQ7RTN6 431 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 P2RY8Q86VZ1 359 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 PROSER1Q86XN7 944 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 PLCZ1Q86YW0 608 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 CLEC4FQ8N1N0 589 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 MAGEE2Q8TD90 523 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 FAR1Q8WVX9 515 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 POP5Q969H6 163 aaKnown RBP10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 C8orf48Q96LL4 319 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 CGRRF1Q99675 332 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 KCTD14Q9BQ13 255 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 C1QTNF1Q9BXJ1 281 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 TRIM54Q9BYV2 358 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 SLC7A5P2Q9GIP4 190 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 NPDC1Q9NQX5 325 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 ERAP1Q9NZ08 941 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 TRAPPC4Q9Y296 219 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 BRWD1Q9NSI6 2320 aa10.55□□□□□ -0.72
NIF3L1-204ENST00000409357 IGKV6D-21A0A0A0MT36 114 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 METTL15A6NJ78 407 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 LOC110117498-PIK3R3F6TDL0 507 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 NME4O00746 187 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 NRP1O14786 923 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 CHMP2AO43633 222 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 TMCC2O75069 709 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 SOAT2O75908 522 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 MFN2O95140 757 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 METTL18O95568 372 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 CLIC3O95833 236 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 LTFP02788 710 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 INSRRP14616 1297 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 ITGA2P17301 1181 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 SHMT2P34897 504 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 YAP1P46937 504 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 CDH6P55285 790 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 EEFSECP57772 596 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 OR2B6P58173 313 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 B2MP61769 119 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 WDR5P61964 334 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 RALGDSQ12967 914 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 GRIK2Q13002 908 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 SLC13A2Q13183 592 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 SEMA3BQ13214 749 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 STARD3Q14849 445 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 SMTNL2Q2TAL5 461 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF404Q494X3 552 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 AGKQ53H12 422 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 KCNT1Q5JUK3 1230 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 TIGD3Q6B0B8 471 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 SLFN12LQ6IEE8 588 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 LETMD1Q6P1Q0 360 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 NPNTQ6UXI9 565 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 ABHD15Q6UXT9 468 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 PRR23BQ6ZRT6 265 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 GDPD3Q7L5L3 318 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 CHST15Q7LFX5 561 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 OTOP3Q7RTS5 596 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 KCTD20Q7Z5Y7 419 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 CCDC103Q8IW40 242 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 RIMKLAQ8IXN7 391 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 METTL4Q8N3J2 472 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 PQLC3Q8N755 202 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 RDM1Q8NG50 284 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 JOSD2Q8TAC2 188 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 PIK3R3Q92569 461 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 HTRA1Q92743 480 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 RORBQ92753 470 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 NCLNQ969V3 563 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 CCDC126Q96EE4 140 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 MFSD3Q96ES6 412 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 REXO5Q96IC2 774 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 TSNARE1Q96NA8 513 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 QKIQ96PU8 341 aaKnown RBP eCLIP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 CALN1Q9BXU9 219 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF717Q9BY31 904 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 FAM49AQ9H0Q0 323 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 KCNN2Q9H2S1 579 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms