RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 NAGAP17050 411 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 GJA1P17302 382 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 CYP11B2P19099 503 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 ATP5DP30049 168 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 MATR3P43243 847 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 UBE2V1Q13404 147 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 PPIGQ13427 754 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 MELKQ14680 651 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 RBMS2Q15434 407 aaKnown RBP4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 MEP1AQ16819 746 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 ALS2CLQ60I27 953 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 ZNF626Q68DY1 528 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 KCTD18Q6PI47 426 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 PPP1R21Q6ZMI0 780 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 Q6ZTK2 550 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 ZNF534Q76KX8 674 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 CCAR2Q8N163 923 aaKnown RBP4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 ARFGAP1Q8N6T3 406 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 PRSS3P2Q8NHM4 247 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 TBC1D16Q8TBP0 767 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 OIT3Q8WWZ8 545 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 LPAR1Q92633 364 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 FAM162AQ96A26 154 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 SPAG5Q96R06 1193 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 PCYT2Q99447 389 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 PLAC1Q9HBJ0 212 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 CHMP1AQ9HD42 196 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 EQTNQ9NQ60 294 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 TRNAU1APQ9NX07 287 aaKnown RBP4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 IL17BQ9UHF5 180 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 A0A1W2PP11 408 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 OR6C76A6NM76 312 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 HEPACAM2A8MVW5 462 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 J3QR06 171 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 SOCS6O14544 535 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 ANKRD28O15084 1053 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 RGS14O43566 566 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 SLU7O95391 586 aaKnown RBP4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 CYP1A2P05177 515 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 PTMAP06454 111 aaKnown RBP4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 HSP90AB1P08238 724 aaKnown RBP4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 OR52Z1P0C646 297 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 HOXB2P14652 356 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 KELP23276 732 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 HOXC13P31276 330 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 GABRA5P31644 462 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 KRT2P35908 639 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 RPL3P39023 403 aaKnown RBP4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 CLDN20P56880 219 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 SSBP2P81877 361 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 FOXM1Q08050 763 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 TUBB2AQ13885 445 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 TRIP6Q15654 476 aaKnown RBP4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 LEXMQ3ZCV2 418 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 KRTCAP3Q53RY4 240 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 ZRANB3Q5FWF4 1079 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 MANEAQ5SRI9 462 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 C18orf63Q68DL7 685 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 BRAT1Q6PJG6 821 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 FIGLAQ6QHK4 219 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 PET117Q6UWS5 81 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 PIWIL3Q7Z3Z3 882 aaKnown RBP4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 TMEM199Q8N511 208 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 SLC16A11Q8NCK7 471 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 GDAP1Q8TB36 358 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 ZFAND2BQ8WV99 257 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 CORO2AQ92828 525 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 ERLEC1Q96DZ1 483 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 NEK1Q96PY6 1258 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 MGME1Q9BQP7 344 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 C16orf70Q9BSU1 422 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 TUBB2BQ9BVA1 445 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 PFDN4Q9NQP4 134 aa4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 WDR33Q9C0J8 1336 aaKnown RBP4.93□□□□□ -1.62
HMGB1P10-201ENST00000395823 LY6G6EA0A0G2JKS1 128 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 A0A1B0GVT2 93 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 H0YAE9 185 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 TO15178 435 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 CLIC2O15247 247 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 KCNN4O15554 427 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 SYNCRIPO60506 623 aaKnown RBP4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 PRAMEF11O60813 436 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 TGFB3P10600 412 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 KCNA5P22460 613 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 CALRP27797 417 aaKnown RBP4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 STX2P32856 288 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 PRKCIP41743 596 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 TGFB2P61812 414 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 MZT1Q08AG7 82 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 ACSM1Q08AH1 577 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 TROAPQ12815 778 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 GPS2Q13227 327 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 NFE2L1Q14494 772 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 CTF1Q16619 201 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 AMZ1Q400G9 498 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 RAB6CQ53S08 254 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 PLBD1Q6P4A8 553 aa4.92□□□□□ -1.62
HMGB1P10-201ENST00000395823 PM20D2Q8IYS1 436 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms