RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PLIN4Q96Q06 1357 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 KHDRBS3O75525 346 aaKnown RBP17.07■□□□□ 0.32
SIN3A-203ENST00000394949 LRATO95237 230 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 CKMT2P17540 419 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 FOXM1Q08050 763 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 BNIP3Q12983 259 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 SPATS1Q496A3 300 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 PRAMEF19Q5SWL8 479 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 OGFOD2Q6N063 350 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 KRT77Q7Z794 578 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 OR8H1Q8NGG4 311 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 ATP13A3Q9H7F0 1226 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 TIMM22Q9Y584 194 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 AP3D1O14617 1153 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 PIP5K1BO14986 540 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 TBX1O43435 398 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 BCAS2O75934 225 aaPredicted RBP17.07■□□□□ 0.32
SIN3A-203ENST00000394949 PABPC4LP0CB38 370 aaKnown RBP17.07■□□□□ 0.32
SIN3A-203ENST00000394949 AKR1D1P51857 326 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 HSF2Q03933 536 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 PUDPQ08623 228 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 SFT2D3Q587I9 215 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 RGMBQ6NW40 437 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 OR4A15Q8NGL6 344 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 PPCDCQ96CD2 204 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 TSSK3Q96PN8 268 aa17.07■□□□□ 0.32
SIN3A-203ENST00000394949 CXCR6O00574 342 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 AP2A2O94973 939 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 C9P02748 559 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 OGNP20774 298 aaKnown RBP17.06■□□□□ 0.32
SIN3A-203ENST00000394949 GLUD2P49448 558 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 PTPN5P54829 565 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 NOGQ13253 232 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 KIAA0930Q6ICG6 404 aaPredicted RBP17.06■□□□□ 0.32
SIN3A-203ENST00000394949 OTOP3Q7RTS5 596 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 LRP10Q7Z4F1 713 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 CMASQ8NFW8 434 aaPredicted RBP17.06■□□□□ 0.32
SIN3A-203ENST00000394949 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
SIN3A-203ENST00000394949 AGO1Q9UL18 857 aaKnown RBP17.06■□□□□ 0.32
SIN3A-203ENST00000394949 PCDHAC2Q9Y5I4 1007 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 FAM234BA2RU67 622 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 NRG1Q02297 640 aaPredicted RBP17.06■□□□□ 0.32
SIN3A-203ENST00000394949 TIFABQ6ZNK6 161 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 RD3Q7Z3Z2 195 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 CCDC185Q8N715 623 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 B3GALT6Q96L58 329 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 SLC9A7Q96T83 725 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 NTPCRQ9BSD7 190 aaKnown RBP17.06■□□□□ 0.32
SIN3A-203ENST00000394949 FEM1AQ9BSK4 669 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 PCDHAC1Q9H158 963 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 SLC25A51Q9H1U9 297 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 AGO3Q9H9G7 860 aaKnown RBP17.06■□□□□ 0.32
SIN3A-203ENST00000394949 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 CFL2Q9Y281 166 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 TBC1D3BA6NDS4 549 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 TRBC1P01850 177 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 PRPS2P11908 318 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 GPX6P59796 221 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 USP41Q3LFD5 358 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 DUSP28Q4G0W2 176 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 CERS6Q6ZMG9 384 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 PDCD10Q9BUL8 212 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 FBXO10Q9UK96 956 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 OR6C75A6NL08 312 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 PAGE1O75459 146 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 SEMA3DO95025 777 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 PIRTP0C851 137 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 TNNI3P19429 210 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 L1CAMP32004 1257 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 OR2B6P58173 313 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 C9orf57Q5W0N0 161 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 TRAPPC5Q8IUR0 188 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 C11orf65Q8NCR3 313 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 CANT1Q8WVQ1 401 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 HSPBAP1Q96EW2 488 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 COPS4Q9BT78 406 aa17.06■□□□□ 0.32
SIN3A-203ENST00000394949 COL1A2P08123 1366 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 M0R2N6 131 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 SLC7A4O43246 635 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 UGT2B17O75795 530 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 PRKD3O94806 890 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 METTL18O95568 372 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 ARF4P18085 180 aaPredicted RBP17.05■□□□□ 0.32
SIN3A-203ENST00000394949 TPGS1Q6ZTW0 290 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 C9orf43Q8TAL5 461 aaPredicted RBP17.05■□□□□ 0.32
SIN3A-203ENST00000394949 TFAP2BQ92481 460 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 COPS8Q99627 209 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 PKP2Q99959 881 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 APOBEC3GQ9HC16 384 aaKnown RBP17.05■□□□□ 0.32
SIN3A-203ENST00000394949 BPIFA1Q9NP55 256 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 TRPV5Q9NQA5 729 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 ACSS2Q9NR19 701 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 EXD2Q9NVH0 621 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 FANCGO15287 622 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 ARL2P36404 184 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 MTAPQ13126 283 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 PARP15Q460N3 678 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 DEF8Q6ZN54 512 aa17.05■□□□□ 0.32
SIN3A-203ENST00000394949 ZDHHC21Q8IVQ6 265 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms