RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 CAPN15O75808 1086 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 CPSF4O95639 269 aaKnown RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 KRT6AP02538 564 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 KRT6BP04259 564 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 OGNP20774 298 aaKnown RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 KRT6CP48668 564 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 TRPC1P48995 793 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 YBEYP58557 167 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 ERVK-8P63133 956 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 CBX3Q13185 183 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 RAB39AQ14964 217 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 FAM110CQ1W6H9 321 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 ALKAL1Q6UXT8 129 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 AADATQ8N5Z0 425 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 SLC47A1Q96FL8 570 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 AARSD1Q9BTE6 412 aaKnown RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 SMPD4Q9NXE4 827 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 TPRKBQ9Y3C4 175 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 LTBP3Q9NS15 1303 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 FAM20BO75063 409 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 MYO1DO94832 1006 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 PAPSS2O95340 614 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 OTCP00480 354 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 CYP4B1P13584 511 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 SPIDRQ14159 915 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 HACD2Q6Y1H2 254 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 HID1Q8IV36 788 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 CNTN4Q8IWV2 1026 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 FNDC8Q8TC99 324 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 LRCH3Q96II8 777 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 OR52E6Q96RD3 313 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 FAM126AQ9BYI3 521 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 ATAD3AQ9NVI7 634 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 AGO1Q9UL18 857 aaKnown RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 RECQL5O94762 991 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 IGFBP6P24592 240 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 AGTR2P50052 363 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 KPNA1P52294 538 aaPredicted RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 FOXA1P55317 472 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 SEMA3BQ13214 749 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 DAG1Q14118 895 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 DMC1Q14565 340 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 BORAQ6PGQ7 559 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 LARP4Q71RC2 724 aaKnown RBP eCLIP13.03□□□□□ -0.32
CUL4A-203ENST00000375441 MINDY1Q8N5J2 469 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 TMBIM1Q969X1 311 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 PTERQ96BW5 349 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 MUS81Q96NY9 551 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 CMTM6Q9NX76 183 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 FKBPLQ9UIM3 349 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 TLR6Q9Y2C9 796 aa13.03□□□□□ -0.32
CUL4A-203ENST00000375441 FAM234BA2RU67 622 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 KPNA6O60684 536 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 SBK3P0C264 359 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 JAK1P23458 1154 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 SLC6A2P23975 617 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 S100A5P33763 92 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 CPSF6Q16630 551 aaKnown RBP eCLIP13.02□□□□□ -0.32
CUL4A-203ENST00000375441 DGUOKQ16854 277 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 ZNF549Q6P9A3 640 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 GALNT5Q7Z7M9 940 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 ADAMTSL2Q86TH1 951 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 SETD9Q8NE22 299 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.32
CUL4A-203ENST00000375441 IPPKQ9H8X2 491 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 NMUR1Q9HB89 426 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 TREX1Q9NSU2 369 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 ARMC1Q9NVT9 282 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 PCDHB9Q9Y5E1 797 aa13.02□□□□□ -0.32
CUL4A-203ENST00000375441 GSNP06396 782 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 CTPS1P17812 591 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 XPAP23025 273 aaPredicted RBP13.02□□□□□ -0.33
CUL4A-203ENST00000375441 ELK4P28324 431 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 TOP3AQ13472 1001 aaPredicted RBP13.02□□□□□ -0.33
CUL4A-203ENST00000375441 CDH18Q13634 790 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 SIM2Q14190 667 aaPredicted RBP13.02□□□□□ -0.33
CUL4A-203ENST00000375441 OR4D1Q15615 310 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 CCDC92Q53HC0 331 aaPredicted RBP13.02□□□□□ -0.33
CUL4A-203ENST00000375441 INTS11Q5TA45 600 aaKnown RBP13.02□□□□□ -0.33
CUL4A-203ENST00000375441 NANOGP8Q6NSW7 305 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 RETREG3Q86VR2 466 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 DENND1CQ8IV53 801 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 MFSD6LQ8IWD5 586 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 PLEKHA8Q96JA3 519 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 ABCG8Q9H221 673 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 NANOGQ9H9S0 305 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 TMLHEQ9NVH6 421 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 PDE10AQ9Y233 779 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 RAP2AP10114 183 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 GPX3P22352 226 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 OXTRP30559 389 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 GGT5P36269 586 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 HSPA7P48741 367 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 GPR15P49685 360 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 FOXM1Q08050 763 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 CCL14Q16627 93 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 CARM1Q86X55 608 aa13.02□□□□□ -0.33
CUL4A-203ENST00000375441 STK40Q8N2I9 435 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms