RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TYW5A2RUC4 315 aaKnown RBP12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 TMEM221A6NGB7 291 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 WASH4PA8MWX3 477 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 TMEM233B4DJY2 109 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 NEDD8-MDP1E9PL57 170 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 CACNG3O60359 315 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 CBFA2T3O75081 653 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 AHSGP02765 367 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 LTBRP36941 435 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 MTA1Q13330 715 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 CDH18Q13634 790 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 SPIDRQ14159 915 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 RNF219Q5W0B1 726 aaPredicted RBP12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 CES5AQ6NT32 575 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 CNSTQ6PJW8 725 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 TMEM184AQ6ZMB5 413 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 ZBTB49Q6ZSB9 765 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 NAT16Q8N8M0 369 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 TNIP2Q8NFZ5 429 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 VAT1Q99536 393 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 CIB1Q99828 191 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 APOL2Q9BQE5 337 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 MRPL46Q9H2W6 279 aaKnown RBP12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 SP110Q9HB58 689 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 NCKIPSDQ9NZQ3 722 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 BLOC1S6Q9UL45 172 aa12.58□□□□□ -0.39
RTFDC1-202ENST00000357348 CHD5Q8TDI0 1954 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 TRIOO75962 3097 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 SOCS2O14508 198 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 ATP6V1G1O75348 118 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 CLDN11O75508 207 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 INHBBP09529 407 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 C7P10643 843 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 NFKB1P19838 968 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 VARSP26640 1264 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 WEE1P30291 646 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 TTKP33981 857 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 GLRBP48167 497 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 NME5P56597 212 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 RAB10P61026 200 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 MAXP61244 160 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 PFKPQ01813 784 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 GNA12Q03113 381 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 GALNT1Q10472 559 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 CDH17Q12864 832 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 ZNF77Q15935 545 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 UGP2Q16851 508 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 ATAT1Q5SQI0 421 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 ITPRIPL1Q6GPH6 555 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 LYSMD3Q7Z3D4 306 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 FAM47BQ8NA70 645 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 TXNDC5Q8NBS9 432 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 C12orf43Q96C57 262 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 SGF29Q96ES7 293 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 VPS50Q96JG6 964 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 MRPL57Q9BQC6 102 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 NOL11Q9H8H0 719 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 CCM2LQ9NUG4 571 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 EBF1Q9UH73 591 aa12.58□□□□□ -0.4
RTFDC1-202ENST00000357348 PSMD12O00232 456 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CBX4O00257 560 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 SNRPB2P08579 225 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 IDO1P14902 403 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 ATP5F1P24539 256 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 HOXD9P28356 352 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CDH15P55291 814 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 ESRRGP62508 458 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 PHEXP78562 749 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 SLC10A7Q0GE19 358 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 FASTKQ14296 549 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 C5orf22Q49AR2 442 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 AFMIDQ63HM1 303 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CXorf57Q6NSI4 855 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 LINGO4Q6UY18 593 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 OTOP3Q7RTS5 596 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 PTAR1Q7Z6K3 402 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CLVS1Q8IUQ0 354 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 SLC41A1Q8IVJ1 513 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 MFSD6LQ8IWD5 586 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 HJURPQ8NCD3 748 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 OR2T34Q8NGX1 318 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 OR2T3Q8NH03 318 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 NXNL1Q96CM4 212 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 ASB16Q96NS5 453 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 SLC25A23Q9BV35 468 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CROTQ9UKG9 612 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 A0A087X1B8 175 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 AQP12BA6NM10 295 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 PSMD3O43242 534 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 POU2F2P09086 479 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CKMT2P17540 419 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 PFKLP17858 780 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 NELFEP18615 380 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 CCNCP24863 283 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 DCKP27707 260 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 HMOX2P30519 316 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 MAPKAPK2P49137 400 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 ITKQ08881 620 aa12.57□□□□□ -0.4
RTFDC1-202ENST00000357348 RALGDSQ12967 914 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms