RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 GNPTGQ9UJJ9 305 aa18.17■□□□□ 0.5
CCDC43-201ENST00000315286 RANBP2P49792 3224 aaKnown RBP18.17■□□□□ 0.5
CCDC43-201ENST00000315286 AZIN1O14977 448 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 SORBS2O94875 1100 aaKnown RBP18.16■□□□□ 0.5
CCDC43-201ENST00000315286 PSMG1O95456 288 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 HSPA1AP0DMV8 641 aaKnown RBP18.16■□□□□ 0.5
CCDC43-201ENST00000315286 HSPA1BP0DMV9 641 aaKnown RBP18.16■□□□□ 0.5
CCDC43-201ENST00000315286 LCP2Q13094 533 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 TRMT5Q32P41 509 aaKnown RBP18.16■□□□□ 0.5
CCDC43-201ENST00000315286 C1orf146Q5VVC0 180 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 LYPLAL1Q5VWZ2 237 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 GDPD4Q6W3E5 623 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 LARP4Q71RC2 724 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC43-201ENST00000315286 AHI1Q8N157 1196 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 NXPE1Q8N323 547 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 ESAMQ96AP7 390 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 C19orf60Q96EN9 201 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 PIDD1Q9HB75 910 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 UTP6Q9NYH9 597 aaKnown RBP18.16■□□□□ 0.5
CCDC43-201ENST00000315286 AGAP14A8MT82 685 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 UBDO15205 165 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 SLC25A14O95258 325 aaPredicted RBP18.16■□□□□ 0.5
CCDC43-201ENST00000315286 TRIM16O95361 564 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 NUDT2P50583 147 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 ACTR3P61158 418 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 HERC3Q15034 1050 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 RCN1Q15293 331 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 DHCR24Q15392 516 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 TGFBIQ15582 683 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 C6orf163Q5TEZ5 329 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 KANK2Q63ZY3 851 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 ICE2Q659A1 982 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 EFCAB3Q8N7B9 438 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 KCNV2Q8TDN2 545 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 STMN2Q93045 179 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 RCN3Q96D15 328 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 MRGPRX3Q96LB0 322 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 C1QTNF3Q9BXJ4 246 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 CD274Q9NZQ7 290 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 ZMYM5Q9UJ78 669 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 CDH22Q9UJ99 828 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 PTGDR2Q9Y5Y4 395 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 PLXNB3Q9ULL4 1909 aa18.16■□□□□ 0.5
CCDC43-201ENST00000315286 TTC34A8MYJ7 566 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 WASH3PC4AMC7 463 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 SLC9A3R1O14745 358 aaPredicted RBP18.15■□□□□ 0.5
CCDC43-201ENST00000315286 SNX2O60749 519 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 GPC4O75487 556 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 PDE5AO76074 875 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 ERFP50548 548 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 PTPN5P54829 565 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 TBL3Q12788 808 aaKnown RBP18.15■□□□□ 0.5
CCDC43-201ENST00000315286 GPM6BQ13491 265 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 TXNDC11Q6PKC3 985 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 CFAP61Q8NHU2 1237 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 HMGCLL1Q8TB92 370 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 FRS2Q8WU20 508 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 RSPRY1Q96DX4 576 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 TACO1Q9BSH4 297 aaKnown RBP18.15■□□□□ 0.5
CCDC43-201ENST00000315286 SLC2A11Q9BYW1 496 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 B4GALT6Q9UBX8 382 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 PCTPQ9UKL6 214 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 ASB1Q9Y576 335 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 C5orf42Q9H799 3197 aa18.15■□□□□ 0.5
CCDC43-201ENST00000315286 CCNT2O60583 730 aaKnown RBP18.14■□□□□ 0.5
CCDC43-201ENST00000315286 C1SP09871 688 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 RECQLP46063 649 aaPredicted RBP18.14■□□□□ 0.5
CCDC43-201ENST00000315286 C9orf50Q5SZB4 431 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 TRIM68Q6AZZ1 485 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 MACC1Q6ZN28 852 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 PLPP6Q8IY26 295 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 DSELQ8IZU8 1212 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 CELF5Q8N6W0 485 aaKnown RBP18.14■□□□□ 0.5
CCDC43-201ENST00000315286 KYQ8NBH2 561 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 ZNF483Q8TF39 744 aaPredicted RBP18.14■□□□□ 0.5
CCDC43-201ENST00000315286 TWIST2Q8WVJ9 160 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 SMG7Q92540 1137 aaKnown RBP18.14■□□□□ 0.5
CCDC43-201ENST00000315286 PBXIP1Q96AQ6 731 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 PLEKHG4BQ96PX9 1271 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 HTATIP2Q9BUP3 242 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 ABCG8Q9H221 673 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 TUBB1Q9H4B7 451 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 FBRSL1Q9HCM7 1045 aaKnown RBP18.14■□□□□ 0.5
CCDC43-201ENST00000315286 DPP7Q9UHL4 492 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 TRANK1O15050 2925 aa18.14■□□□□ 0.5
CCDC43-201ENST00000315286 PIP5K1BO14986 540 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 PRDX3P30048 256 aaKnown RBP18.14■□□□□ 0.49
CCDC43-201ENST00000315286 VIPR2P41587 438 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 ATP13A5Q4VNC0 1218 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 SWT1Q5T5J6 900 aaKnown RBP18.14■□□□□ 0.49
CCDC43-201ENST00000315286 SBSNQ6UWP8 590 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 TMC5Q6UXY8 1006 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 DTX3LQ8TDB6 740 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 MCOLN1Q9GZU1 580 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 MTG2Q9H4K7 406 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 AKTIPQ9H8T0 292 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 CERS4Q9HA82 394 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 DUS2Q9NX74 493 aaKnown RBP18.14■□□□□ 0.49
CCDC43-201ENST00000315286 FBXO10Q9UK96 956 aa18.14■□□□□ 0.49
CCDC43-201ENST00000315286 TMCO1Q9UM00 188 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms