RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 LRRK2Q5S007 2527 aa9.17□□□□□ -0.94
CNOT9-202ENST00000295701 CCDC88CQ9P219 2028 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 C1orf232A0A0U1RR37 186 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 CLEC18AA5D8T8 446 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 PRR19A6NJB7 356 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 POLR1CO15160 346 aaPredicted RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 MATN3O15232 486 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 GRID2O43424 1007 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 MMP2P08253 660 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 TCN2P20062 427 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 MSX1P28360 303 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 SERPINB6P35237 376 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 STAT5AP42229 794 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 SSR1P43307 286 aaKnown RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 LEPRP48357 1165 aaKnown RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 MLLT10P55197 1068 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 UBE2IP63279 158 aaKnown RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 TYRO3Q06418 890 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 FOXM1Q08050 763 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 GALNT2Q10471 571 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 LRP8Q14114 963 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 DPYSL3Q14195 570 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 ERV3-1Q14264 604 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 PIGHQ14442 188 aaPredicted RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 CCDC122Q5T0U0 273 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 HGSNATQ68CP4 663 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 ALG1LQ6GMV1 187 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 CLEC18BQ6UXF7 455 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 SLC9B2Q86UD5 537 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 NDUFAF2Q8N183 169 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 CLEC18CQ8NCF0 446 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 GALNT6Q8NCL4 622 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 TEKT4Q8WW24 435 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 APOBEC4Q8WW27 367 aaKnown RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 NUP85Q9BW27 656 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 OR2AG1Q9H205 316 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 FAM83DQ9H4H8 585 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 PCDH9Q9HC56 1237 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 KLC4Q9NSK0 619 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 SIDT1Q9NXL6 827 aaKnown RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 VPS18Q9P253 973 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 ZNF624Q9P2J8 865 aaPredicted RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 ANAPC7Q9UJX3 599 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 ANAPC2Q9UJX6 822 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 CROTQ9UKG9 612 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 MAN2B2Q9Y2E5 1009 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 RPS6KL1Q9Y6S9 549 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 SEC16AO15027 2179 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 ESPL1Q14674 2120 aa9.16□□□□□ -0.94
CNOT9-202ENST00000295701 USP9YO00507 2555 aaPredicted RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 USP9XQ93008 2570 aaPredicted RBP9.16□□□□□ -0.94
CNOT9-202ENST00000295701 RP1L1Q8IWN7 2480 aaPredicted RBP9.15□□□□□ -0.94
CNOT9-202ENST00000295701 SPTBN1Q01082 2364 aaKnown RBP9.15□□□□□ -0.94
CNOT9-202ENST00000295701 SHANK1Q9Y566 2161 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 KIF1CO43896 1103 aaKnown RBP9.15□□□□□ -0.94
CNOT9-202ENST00000295701 NUAK1O60285 661 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 MTX2O75431 263 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 JCHAINP01591 159 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 PIRTP0C851 137 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 MYBL1P10243 752 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 F3P13726 295 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 DLSTP36957 453 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 CD86P42081 329 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 ZNF165P49910 485 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 GBE1Q04446 702 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 GALNT3Q14435 633 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 PAFAH1B3Q15102 231 aaKnown RBP9.15□□□□□ -0.94
CNOT9-202ENST00000295701 SEPT7Q16181 437 aaKnown RBP9.15□□□□□ -0.94
CNOT9-202ENST00000295701 ANO6Q4KMQ2 910 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 LACTB2Q53H82 288 aaPredicted RBP9.15□□□□□ -0.94
CNOT9-202ENST00000295701 ANKRD20A8PQ5CZ79 823 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 ALS2CLQ60I27 953 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 CRTC3Q6UUV7 619 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 ADGRG6Q86SQ4 1221 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 PQLC3Q8N755 202 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 NIPA2Q8N8Q9 360 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 GPR26Q8NDV2 337 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 FAM71BQ8TC56 605 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 MIB2Q96AX9 1013 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 SH3KBP1Q96B97 665 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 TRIM11Q96F44 468 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 C9orf72Q96LT7 481 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 TGM7Q96PF1 710 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 OR6C1Q96RD1 312 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 LYSMD1Q96S90 227 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 RUFY1Q96T51 708 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 ZPBPQ9BS86 351 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 HERPUD2Q9BSE4 406 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 MLPHQ9BV36 600 aaPredicted RBP9.15□□□□□ -0.94
CNOT9-202ENST00000295701 OSGEPL1Q9H4B0 414 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 RUBCNLQ9H714 662 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 AKIRIN1Q9H9L7 192 aaPredicted RBP9.15□□□□□ -0.94
CNOT9-202ENST00000295701 TRIM10Q9UDY6 481 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 IP6K2Q9UHH9 426 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 SHOC2Q9UQ13 582 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 DNAJC16Q9Y2G8 782 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 KCNMB2Q9Y691 235 aa9.15□□□□□ -0.94
CNOT9-202ENST00000295701 MDC1Q14676 2089 aaKnown RBP9.14□□□□□ -0.95
CNOT9-202ENST00000295701 MN1Q10571 1320 aaPredicted RBP9.14□□□□□ -0.95
CNOT9-202ENST00000295701 KIR2DS5A0A0G2JLQ3 304 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms