RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 CLCNKAP51800 687 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 ZNF135P52742 658 aaPredicted RBP11.8□□□□□ -0.52
SPC25-201ENST00000282074 EPHB1P54762 984 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 RPL7AP62424 266 aaKnown RBP11.8□□□□□ -0.52
SPC25-201ENST00000282074 CLEC16AQ2KHT3 1053 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 PPP6R3Q5H9R7 873 aaPredicted RBP11.8□□□□□ -0.52
SPC25-201ENST00000282074 FAM199XQ6PEV8 388 aaPredicted RBP11.8□□□□□ -0.52
SPC25-201ENST00000282074 IQCKQ8N0W5 287 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 NPWQ8N729 165 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 C19orf60Q96EN9 201 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 PCDHB18PQ96TA0 734 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 L2HGDHQ9H9P8 463 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 PCYT1BQ9Y5K3 369 aaPredicted RBP11.8□□□□□ -0.52
SPC25-201ENST00000282074 SLC30A1Q9Y6M5 507 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 CSMD1Q96PZ7 3565 aa11.8□□□□□ -0.52
SPC25-201ENST00000282074 ZNF106Q9H2Y7 1883 aaKnown RBP11.8□□□□□ -0.52
SPC25-201ENST00000282074 A0A0U1RQS6 177 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 TCRBV5S1A1TA0A578 114 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 ANKUB1A6NFN9 424 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 KRT86O43790 486 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 KIF1CO43896 1103 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 NUAK1O60285 661 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 STC1P52823 247 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 RPS18P62269 152 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 ACY1Q03154 408 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 TUBB3Q13509 450 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 CA9Q16790 459 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 MARC1Q5VT66 337 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 PWWP2BQ6NUJ5 590 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 FAM92BQ6ZTR7 304 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 RBM12BQ8IXT5 1001 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 PGBD5Q8N414 524 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 RBMXL3Q8N7X1 1067 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 SIDT2Q8NBJ9 832 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 FDCSPQ8NFU4 85 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 SNRNP40Q96DI7 357 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 KCTD15Q96SI1 283 aaPredicted RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 RUFY1Q96T51 708 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 CARD9Q9H257 536 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 OSGEPL1Q9H4B0 414 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 RUBCNLQ9H714 662 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 KLC4Q9NSK0 619 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 SEPT11Q9NVA2 429 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 GPR83Q9NYM4 423 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 EPHA6Q9UF33 1036 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 CNOT6Q9ULM6 557 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 F8P00451 2351 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 POLEQ07864 2286 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 A0A0J9YYE9 177 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 ZNF185O15231 689 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 ZSCAN12O43309 604 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 RNF8O76064 485 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 TMEM63AO94886 807 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 TIAF1O95411 115 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 PEX11BO96011 259 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 TRBC1P01850 177 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 KLK3P07288 261 aaPredicted RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 PDHA1P08559 390 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 TPM1P09493 284 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 PSMA2P25787 234 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 SLC19A1P41440 591 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 PTGIRP43119 386 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 MMP13P45452 471 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 CAPZBP47756 277 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 ARL4DP49703 201 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 RRADP55042 308 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 ITGA1P56199 1179 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 POLR2FP61218 127 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 MAXP61244 160 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 FANCCQ00597 558 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 IL10RAQ13651 578 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 IRGCQ6NXR0 463 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 MED25Q71SY5 747 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 MON1BQ7L1V2 547 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 PSTKQ8IV42 348 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 VSTM4Q8IW00 320 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 TMEM102Q8N9M5 508 aaPredicted RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 UBXN4Q92575 508 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 XPO4Q9C0E2 1151 aaKnown RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 RAB33BQ9H082 229 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 FAM83DQ9H4H8 585 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 ZWILCHQ9H900 591 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 AKIRIN1Q9H9L7 192 aaPredicted RBP11.79□□□□□ -0.52
SPC25-201ENST00000282074 POT1Q9NUX5 634 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 ASF1BQ9NVP2 202 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 C5AR2Q9P296 337 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 PCSK1NQ9UHG2 260 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 ENTPD4Q9Y227 616 aa11.79□□□□□ -0.52
SPC25-201ENST00000282074 DIDO1Q9BTC0 2240 aaKnown RBP11.78□□□□□ -0.52
SPC25-201ENST00000282074 SETD2Q9BYW2 2564 aaPredicted RBP11.78□□□□□ -0.52
SPC25-201ENST00000282074 PDZK1P1A8MUH7 402 aa11.78□□□□□ -0.52
SPC25-201ENST00000282074 PRPSAP2O60256 369 aa11.78□□□□□ -0.52
SPC25-201ENST00000282074 FZD6O60353 706 aa11.78□□□□□ -0.52
SPC25-201ENST00000282074 CPNE3O75131 537 aaKnown RBP11.78□□□□□ -0.52
SPC25-201ENST00000282074 MTA2O94776 668 aa11.78□□□□□ -0.52
SPC25-201ENST00000282074 CDH6P55285 790 aa11.78□□□□□ -0.52
SPC25-201ENST00000282074 PER3P56645 1201 aa11.78□□□□□ -0.52
SPC25-201ENST00000282074 ITKQ08881 620 aa11.78□□□□□ -0.52
SPC25-201ENST00000282074 TUBB2AQ13885 445 aa11.78□□□□□ -0.52
SPC25-201ENST00000282074 HSP90AA4PQ58FG1 418 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms