RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SELPLGQ14242 412 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 NPTX1Q15818 432 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 CCL15Q16663 113 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 CYS1Q717R9 158 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 RIOX2Q8IUF8 465 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 NLGN4XQ8N0W4 816 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 ZNF540Q8NDQ6 660 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 OSCP1Q8WVF1 389 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 MRPL57Q9BQC6 102 aaKnown RBP12.73□□□□□ -0.37
HERC6-202ENST00000273960 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 RUBCNLQ9H714 662 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 RBPJLQ9UBG7 517 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 SPEF1Q9Y4P9 236 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 SLC12A8A0AV02 714 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 TTC24A2A3L6 582 aaPredicted RBP12.73□□□□□ -0.37
HERC6-202ENST00000273960 PCP4L1A6NKN8 68 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 SLC1A7O00341 560 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 TMCC2O75069 709 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 CPNE3O75131 537 aaKnown RBP12.73□□□□□ -0.37
HERC6-202ENST00000273960 ANGPTL1O95841 491 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 CCDC159P0C7I6 412 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 CPB1P15086 417 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 ITIH1P19827 911 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 OR2B6P58173 313 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 SNRPD2P62316 118 aaKnown RBP12.73□□□□□ -0.37
HERC6-202ENST00000273960 AASDHQ4L235 1098 aaPredicted RBP12.73□□□□□ -0.37
HERC6-202ENST00000273960 TJAP1Q5JTD0 557 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 ATAD3CQ5T2N8 411 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 CYHR1Q6ZMK1 362 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 MILR1Q7Z6M3 343 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 LGALS12Q96DT0 336 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 PCYT2Q99447 389 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 CDT1Q9H211 546 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 RPRD1BQ9NQG5 326 aaKnown RBP12.73□□□□□ -0.37
HERC6-202ENST00000273960 AASDHPPTQ9NRN7 309 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 DNAJC15Q9Y5T4 150 aa12.73□□□□□ -0.37
HERC6-202ENST00000273960 CHRNA1P02708 482 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 CD36P16671 472 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 DGKQP52824 942 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 CELF3Q5SZQ8 465 aaKnown RBP12.72□□□□□ -0.37
HERC6-202ENST00000273960 AHSA2Q719I0 299 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 IQCF2Q8IXL9 164 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 PTGR2Q8N8N7 351 aaPredicted RBP12.72□□□□□ -0.37
HERC6-202ENST00000273960 SLC7A14Q8TBB6 771 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 TWIST2Q8WVJ9 160 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 ZUFSPQ96AP4 578 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 KIF12Q96FN5 646 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 MEAF6Q9HAF1 191 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 SETD4Q9NVD3 440 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 EIF3LQ9Y262 564 aaKnown RBP12.72□□□□□ -0.37
HERC6-202ENST00000273960 CLDN5O00501 218 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 RGS5O15539 181 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 MT-ND2P03891 347 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 FCGR1AP12314 374 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 WEE1P30291 646 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 ALDH3A2P51648 485 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 AP3M2P53677 418 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 TRAF3Q13114 568 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 TRIM60Q495X7 471 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 LCN8Q6JVE9 175 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 ARMCX2Q7L311 632 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 STON2Q8WXE9 905 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 KCNS3Q9BQ31 491 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 THUMPD3Q9BV44 507 aaKnown RBP12.72□□□□□ -0.37
HERC6-202ENST00000273960 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 RERGLQ9H628 205 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 NTN4Q9HB63 628 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 RABL2AQ9UBK7 228 aaPredicted RBP12.72□□□□□ -0.37
HERC6-202ENST00000273960 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 TTC34A8MYJ7 566 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 TARM1B6A8C7 271 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 TEX28O15482 410 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 ARCN1P48444 511 aaKnown RBP12.72□□□□□ -0.37
HERC6-202ENST00000273960 ITKQ08881 620 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 RAPSNQ13702 412 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 MPZL3Q6UWV2 235 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 LARP4Q71RC2 724 aaKnown RBP eCLIP12.72□□□□□ -0.37
HERC6-202ENST00000273960 NPWQ8N729 165 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 LEMD2Q8NC56 503 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 UBASH3BQ8TF42 649 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 TMEM125Q96AQ2 219 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 RHOBTB2Q9BYZ6 727 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 FBXO5Q9UKT4 447 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 VPS4AQ9UN37 437 aa12.72□□□□□ -0.37
HERC6-202ENST00000273960 COL2A1P02458 1487 aaPredicted RBP12.71□□□□□ -0.37
HERC6-202ENST00000273960 DOCK5Q9H7D0 1870 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 CCDC154A6NI56 674 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 EFCAB9A8MZ26 197 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 UBXN8O00124 270 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 UPK1BO75841 260 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 GPIP06744 558 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 ABCB1P08183 1280 aaPredicted RBP12.71□□□□□ -0.37
HERC6-202ENST00000273960 PPP5CP53041 499 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 TPI1P60174 286 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 CD83Q01151 205 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 ADIGQ0VDE8 80 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 FAAH2Q6GMR7 532 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 USP51Q70EK9 711 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 METTL4Q8N3J2 472 aa12.71□□□□□ -0.37
HERC6-202ENST00000273960 PNPT1Q8TCS8 783 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms