RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 BspryQ80YW5 473 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Npas4Q8BGD7 802 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Hmbox1Q8BJA3 419 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 ItchQ8C863 864 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Adamts2Q8C9W3 1213 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Retreg1dQ8VE91 480 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tmem30aQ8VEK0 364 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Olfr847Q8VFF4 312 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Mark1Q8VHJ5 795 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Krt5Q922U2 580 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 St7Q99M96 577 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Klhdc8bQ9D2D9 354 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Q9D454 513 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Psmd12Q9D8W5 456 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Xrn2Q9DBR1 951 aaKnown RBP11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tubb3Q9ERD7 450 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Cldn19Q9ET38 224 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ccnl2Q9JJA7 518 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Spag6Q9JLI7 507 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Rbck1Q9WUB0 508 aa11.29□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ighg3A0A1Y7VJN6 399 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Btbd35f28A2CFD5 498 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gm10250G3X9L6 160 aaKnown RBP11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Btbd35f30J3QML3 498 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gm13128L7MU96 475 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 P01740 135 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Scd1P13516 355 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tap1P21958 724 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Man1a1P45700 655 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Rab10P61027 200 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Pitx1P70314 315 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Msx2Q03358 267 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ccdc106Q3ULM0 279 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Nxpe4Q52KP5 543 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Dyrk2Q5U4C9 599 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Klf4Q60793 483 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tmem151aQ6GQT5 468 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Cyp2d40Q6P8N9 338 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Sel1l3Q80TS8 1137 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Arhgap25Q8BYW1 648 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Teddm1bQ8CC62 306 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 TwnkQ8CIW5 685 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Igsf8Q8R366 611 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Zdhhc12Q8VC90 267 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Fads1Q920L1 447 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Nuf2Q99P69 463 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Zfp655Q9CZP3 541 aaKnown RBP11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ubqln5Q9D4I8 510 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Pmepa1Q9D7R2 260 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Dusp6Q9DBB1 381 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Atp5hQ9DCX2 161 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Jph3Q9ET77 744 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 CtsrQ9JIA9 334 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tgm1Q9JLF6 815 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Kat6aQ8BZ21 2003 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Scn8aQ9WTU3 1978 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gm29106A0A087WSP8 697 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gfra2O08842 464 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Prkag1O54950 330 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 P01878 344 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 AlplP09242 524 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Cyp17a1P27786 507 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Rps24P62849 133 aaKnown RBP11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Cdk7Q03147 346 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Fam131bQ3TY60 332 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gm4951Q3UED7 406 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ermp1Q3UVK0 898 aaKnown RBP11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Prss53Q571E5 552 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 MslnQ61468 625 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 ZpbpQ62522 350 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Lingo3Q6GQU6 589 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 ShbQ6PD21 503 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Olfr301Q7TS04 311 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Chn2Q80XD1 332 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Zfp719Q8BIV1 735 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Mpp7Q8BVD5 576 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Csnk1g3Q8C4X2 424 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Adprhl2Q8CG72 370 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Mtrf1Q8K126 446 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Sgpl1Q8R0X7 568 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Ola1Q9CZ30 396 aaKnown RBP11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 4930524N10RikQ9D519 233 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Galk1Q9R0N0 392 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Padi3Q9Z184 664 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gria4Q9Z2W8 902 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Scn5aQ9JJV9 2019 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 6720489N17RikA0A1Y7VJW0 127 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Btnl4A2CG29 586 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Gbp11A9YVJ5 442 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 UprtB1AVZ0 310 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Vmn1r76F8VQ63 324 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 P01673 111 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Hoxa9P09631 271 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Lsp1P19973 330 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Folr1P35846 255 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 E2f2P56931 443 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Smpdl3bP58242 456 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Tial1P70318 392 aaKnown RBP11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Lmf1Q3U3R4 574 aa11.28□□□□□ -0.6
Ddx55-201ENSMUST00000071057 Nkain3Q3URJ8 181 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms