RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gm3854A0A1B0GSS6 495 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr1160A2AVT0 319 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Vmn2r14E9Q759 848 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Trafd1Q3UDK1 580 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cage1Q5IR70 849 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Xlr3aQ60595 226 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Fastkd5Q7TMV3 762 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Sorcs3Q8VI51 1219 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Prb1Q91X93 504 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Rev1Q920Q2 1249 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Mrpl57Q9CQF8 102 aaKnown RBP22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Psmd8Q9CX56 353 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Slc34a2Q9DBP0 697 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Ajm1A2AJA9 974 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gbp4A4UUI3 631 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 AldoaP05064 364 aaKnown RBP22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gria2P23819 883 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Hfe2Q7TQ32 420 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr1355Q7TQU9 310 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gprc6aQ8K4Z6 928 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr722Q8VFC8 308 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tekt2Q922G7 430 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gbe1Q9D6Y9 702 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Glipr1l1Q9DAG6 236 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cmtm7Q9ESD6 167 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Hao2Q9NYQ2 353 aa22.68■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Skint11A7XV14 364 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cldn34b1B1AZQ8 209 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Catsperg2C6KI89 1145 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Vmn2r118E9Q1C1 853 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Rab10P61027 200 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gata5P97489 404 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 SbplQ3TUY3 232 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Glp2rQ5IXF8 512 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Scaf4Q6PFF0 1209 aaKnown RBP22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Rmdn2Q8BSE0 410 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Nmur2Q8BZ39 395 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Nudcd3Q8R1N4 363 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Mat1aQ91X83 396 aaKnown RBP22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Rgs18Q99PG4 235 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Nsmce3Q9CPR8 279 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Snrnp48Q9D361 337 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cldn34b2Q9D9N2 209 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Col12a1Q60847 3120 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Igkv6-29A0A0G2JEI6 115 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Nlrp1bA1Z198 1177 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Fam170bE9PXT9 378 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Ccr7P47774 378 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 S100a5P63084 93 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Thumpd3P97770 505 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Ubtfl1Q3USZ2 394 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Akap14Q3V0I7 536 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Ampd1Q3V1D3 745 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Bdp1Q571C7 2467 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tab3Q571K4 716 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Adam2Q60718 735 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gata6Q61169 589 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Fam126aQ6P9N1 521 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Ddx51Q6P9R1 639 aaKnown RBP22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cand2Q6ZQ73 1235 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Serpinb9dQ8BMT0 377 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr273Q8VG87 317 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Glra3Q91XP5 464 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 ClpsQ9CQC2 113 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Sec13Q9D1M0 322 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Kctd4Q9D7X1 259 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Actrt2Q9D9L5 377 aa22.67■■□□□ 1.22
Upf3a-201ENSMUST00000043767 MttpO08601 894 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 H2-Eb1P04230 264 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 FasP25446 327 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Klkb1P26262 638 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Casp2P29594 452 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 HmgclP38060 325 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cyp2a12P56593 492 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tas2r16P59529 299 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Pde7aP70453 456 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 RalgdsQ03385 852 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Hsdl2Q2TPA8 490 aaKnown RBP22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Meaf6Q2VPQ9 191 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Kctd8Q50H33 476 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Itih3Q61704 889 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 NovQ64299 354 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Ssxb3Q6XAS4 170 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Rspo2Q8BFU0 243 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Pex5lQ8C437 567 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Fnbp1lQ8K012 605 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Myoz3Q8R4E4 245 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr809Q8VEX8 328 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr96Q8VFE3 313 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr449Q8VGW8 311 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tspan1Q99J59 240 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Actr3Q99JY9 418 aaKnown RBP22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Kat2aQ9JHD2 830 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Herpud2Q9JJC9 404 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Clcn5Q9WVD4 746 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr694K7N641 315 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Sod3O09164 251 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Nthl1O35980 300 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 ChgbP16014 677 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 RxraP28700 467 aa22.66■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms