Protein–RNA interactions for Protein: O35980

Nthl1, Endonuclease III-like protein 1, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nthl1O35980 Gm25239-201ENSMUST00000174915 86 ntBASIC38.59■■■■□ 3.77
Nthl1O35980 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
Nthl1O35980 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Nthl1O35980 Gm15042-201ENSMUST00000120212 883 ntBASIC33.72■■■□□ 2.99
Nthl1O35980 Gm24109-201ENSMUST00000175489 103 ntBASIC33.45■■■□□ 2.95
Nthl1O35980 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Nthl1O35980 Gm15045-201ENSMUST00000117359 883 ntBASIC32.99■■■□□ 2.87
Nthl1O35980 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Nthl1O35980 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Nthl1O35980 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Nthl1O35980 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Nthl1O35980 Gm23366-201ENSMUST00000175022 89 ntBASIC32.2■■■□□ 2.75
Nthl1O35980 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
Nthl1O35980 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Nthl1O35980 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Nthl1O35980 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Nthl1O35980 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.22■■■□□ 2.59
Nthl1O35980 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.19■■■□□ 2.58
Nthl1O35980 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nthl1O35980 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Nthl1O35980 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Nthl1O35980 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31■■■□□ 2.55
Nthl1O35980 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.83■■■□□ 2.53
Nthl1O35980 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Nthl1O35980 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Nthl1O35980 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Nthl1O35980 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Nthl1O35980 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Nthl1O35980 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Nthl1O35980 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Nthl1O35980 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.55■■■□□ 2.48
Nthl1O35980 Psd-208ENSMUST00000224556 2034 ntBASIC30.54■■■□□ 2.48
Nthl1O35980 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Nthl1O35980 Gm25238-201ENSMUST00000174914 89 ntBASIC30.46■■■□□ 2.47
Nthl1O35980 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.39■■■□□ 2.46
Nthl1O35980 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Nthl1O35980 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Nthl1O35980 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.99■■■□□ 2.39
Nthl1O35980 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
Nthl1O35980 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Nthl1O35980 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Nthl1O35980 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Nthl1O35980 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.7■■■□□ 2.35
Nthl1O35980 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Nthl1O35980 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Nthl1O35980 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Nthl1O35980 Gm27325-201ENSMUST00000175467 74 ntBASIC29.54■■■□□ 2.32
Nthl1O35980 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.47■■■□□ 2.31
Nthl1O35980 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
Nthl1O35980 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.41■■■□□ 2.3
Nthl1O35980 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Nthl1O35980 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Nthl1O35980 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.33■■■□□ 2.29
Nthl1O35980 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.27■■■□□ 2.28
Nthl1O35980 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Nthl1O35980 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.14■■■□□ 2.25
Nthl1O35980 Gm25262-201ENSMUST00000174934 133 ntBASIC29.13■■■□□ 2.25
Nthl1O35980 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Nthl1O35980 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Nthl1O35980 Rab21-202ENSMUST00000218831 843 ntBASIC29■■■□□ 2.23
Nthl1O35980 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Nthl1O35980 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.91■■■□□ 2.22
Nthl1O35980 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Nthl1O35980 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.88■■■□□ 2.21
Nthl1O35980 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Nthl1O35980 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Nthl1O35980 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Nthl1O35980 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Nthl1O35980 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.7■■■□□ 2.19
Nthl1O35980 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Nthl1O35980 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Nthl1O35980 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.66■■■□□ 2.18
Nthl1O35980 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Nthl1O35980 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Nthl1O35980 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.64■■■□□ 2.18
Nthl1O35980 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Nthl1O35980 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Nthl1O35980 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Nthl1O35980 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Nthl1O35980 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.59■■■□□ 2.17
Nthl1O35980 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.58■■■□□ 2.17
Nthl1O35980 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Nthl1O35980 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Nthl1O35980 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Nthl1O35980 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.16
Nthl1O35980 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Nthl1O35980 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Nthl1O35980 Gm26115-201ENSMUST00000175605 87 ntBASIC28.39■■■□□ 2.14
Nthl1O35980 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Nthl1O35980 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.37■■■□□ 2.13
Nthl1O35980 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.35■■■□□ 2.13
Nthl1O35980 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.34■■■□□ 2.13
Nthl1O35980 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Nthl1O35980 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Nthl1O35980 Gm8109-201ENSMUST00000194076 746 ntBASIC28.28■■■□□ 2.12
Nthl1O35980 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Nthl1O35980 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Nthl1O35980 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.23■■■□□ 2.11
Nthl1O35980 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Nthl1O35980 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms