Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gm25239-201ENSMUST00000174915 86 ntBASIC39.52■■■■□ 3.92
Gm3854A0A1B0GSS6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
Gm3854A0A1B0GSS6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Gm3854A0A1B0GSS6 Gm15042-201ENSMUST00000120212 883 ntBASIC34.37■■■■□ 3.09
Gm3854A0A1B0GSS6 Gm24109-201ENSMUST00000175489 103 ntBASIC34.32■■■■□ 3.08
Gm3854A0A1B0GSS6 Gm15045-201ENSMUST00000117359 883 ntBASIC33.54■■■□□ 2.96
Gm3854A0A1B0GSS6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
Gm3854A0A1B0GSS6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
Gm3854A0A1B0GSS6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Gm3854A0A1B0GSS6 Gm23366-201ENSMUST00000175022 89 ntBASIC32.99■■■□□ 2.87
Gm3854A0A1B0GSS6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Gm3854A0A1B0GSS6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Gm3854A0A1B0GSS6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Gm3854A0A1B0GSS6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.09■■■□□ 2.73
Gm3854A0A1B0GSS6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Gm3854A0A1B0GSS6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Gm3854A0A1B0GSS6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.83■■■□□ 2.69
Gm3854A0A1B0GSS6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Gm3854A0A1B0GSS6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.77■■■□□ 2.68
Gm3854A0A1B0GSS6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Gm3854A0A1B0GSS6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gm3854A0A1B0GSS6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Gm3854A0A1B0GSS6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.39■■■□□ 2.62
Gm3854A0A1B0GSS6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Gm3854A0A1B0GSS6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Gm3854A0A1B0GSS6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Gm3854A0A1B0GSS6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Gm3854A0A1B0GSS6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.26■■■□□ 2.59
Gm3854A0A1B0GSS6 Gm25238-201ENSMUST00000174914 89 ntBASIC31.24■■■□□ 2.59
Gm3854A0A1B0GSS6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gm3854A0A1B0GSS6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
Gm3854A0A1B0GSS6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Gm3854A0A1B0GSS6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.75■■■□□ 2.51
Gm3854A0A1B0GSS6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Gm3854A0A1B0GSS6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
Gm3854A0A1B0GSS6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Gm3854A0A1B0GSS6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Gm3854A0A1B0GSS6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Gm3854A0A1B0GSS6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.37■■■□□ 2.45
Gm3854A0A1B0GSS6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Gm3854A0A1B0GSS6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
Gm3854A0A1B0GSS6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.22■■■□□ 2.43
Gm3854A0A1B0GSS6 Psd-208ENSMUST00000224556 2034 ntBASIC30.2■■■□□ 2.43
Gm3854A0A1B0GSS6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.15■■■□□ 2.42
Gm3854A0A1B0GSS6 Gm27325-201ENSMUST00000175467 74 ntBASIC30.07■■■□□ 2.4
Gm3854A0A1B0GSS6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.05■■■□□ 2.4
Gm3854A0A1B0GSS6 Gm25262-201ENSMUST00000174934 133 ntBASIC30.04■■■□□ 2.4
Gm3854A0A1B0GSS6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Gm3854A0A1B0GSS6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Gm3854A0A1B0GSS6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Gm3854A0A1B0GSS6 Rab21-202ENSMUST00000218831 843 ntBASIC29.65■■■□□ 2.34
Gm3854A0A1B0GSS6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Gm3854A0A1B0GSS6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.6■■■□□ 2.33
Gm3854A0A1B0GSS6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Gm3854A0A1B0GSS6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.57■■■□□ 2.32
Gm3854A0A1B0GSS6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.57■■■□□ 2.32
Gm3854A0A1B0GSS6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.53■■■□□ 2.32
Gm3854A0A1B0GSS6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Gm3854A0A1B0GSS6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.49■■■□□ 2.31
Gm3854A0A1B0GSS6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Gm3854A0A1B0GSS6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Gm3854A0A1B0GSS6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.4■■■□□ 2.3
Gm3854A0A1B0GSS6 Gm26115-201ENSMUST00000175605 87 ntBASIC29.36■■■□□ 2.29
Gm3854A0A1B0GSS6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Gm3854A0A1B0GSS6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Gm3854A0A1B0GSS6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Gm3854A0A1B0GSS6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Gm3854A0A1B0GSS6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.24■■■□□ 2.27
Gm3854A0A1B0GSS6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gm3854A0A1B0GSS6 Gm8109-201ENSMUST00000194076 746 ntBASIC29.18■■■□□ 2.26
Gm3854A0A1B0GSS6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Gm3854A0A1B0GSS6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.15■■■□□ 2.26
Gm3854A0A1B0GSS6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.14■■■□□ 2.26
Gm3854A0A1B0GSS6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.13■■■□□ 2.25
Gm3854A0A1B0GSS6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Gm3854A0A1B0GSS6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Gm3854A0A1B0GSS6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Gm3854A0A1B0GSS6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Gm3854A0A1B0GSS6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Gm3854A0A1B0GSS6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Gm3854A0A1B0GSS6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.96■■■□□ 2.23
Gm3854A0A1B0GSS6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Gm3854A0A1B0GSS6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Gm3854A0A1B0GSS6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Gm3854A0A1B0GSS6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Gm3854A0A1B0GSS6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.76■■■□□ 2.19
Gm3854A0A1B0GSS6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Gm3854A0A1B0GSS6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Gm3854A0A1B0GSS6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Gm3854A0A1B0GSS6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Gm3854A0A1B0GSS6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.7■■■□□ 2.18
Gm3854A0A1B0GSS6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Gm3854A0A1B0GSS6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Gm3854A0A1B0GSS6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
Gm3854A0A1B0GSS6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Gm3854A0A1B0GSS6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Gm3854A0A1B0GSS6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.6■■■□□ 2.17
Gm3854A0A1B0GSS6 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.59■■■□□ 2.17
Gm3854A0A1B0GSS6 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.56■■■□□ 2.16
Gm3854A0A1B0GSS6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms