RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 YPL109CQ02981 657 aa8.36□□□□□ -1.07
snR78snR78 TPP1Q03796 238 aa8.36□□□□□ -1.07
snR78snR78 FAA3P39002 694 aa8.35□□□□□ -1.07
snR78snR78 PUS7Q08647 676 aaKnown RBP8.35□□□□□ -1.07
snR78snR78 LRG1P35688 1017 aa8.34□□□□□ -1.07
snR78snR78 SSY1Q03770 852 aa8.34□□□□□ -1.07
snR78snR78 YLR257WQ06146 321 aaKnown RBP8.34□□□□□ -1.07
snR78snR78 HXK1P04806 485 aaKnown RBP8.33□□□□□ -1.08
snR78snR78 SCP160P06105 1222 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
snR78snR78 PRO1P32264 428 aa8.33□□□□□ -1.08
snR78snR78 HSP78P33416 811 aa8.33□□□□□ -1.08
snR78snR78 YGL140CP53120 1219 aa8.33□□□□□ -1.08
snR78snR78 NMD3P38861 518 aaKnown RBP8.32□□□□□ -1.08
snR78snR78 PEX7P39108 375 aa8.32□□□□□ -1.08
snR78snR78 DFG16Q99234 619 aa8.32□□□□□ -1.08
snR78snR78 ADD66P36040 267 aa8.31□□□□□ -1.08
snR78snR78 ECL1P48235 211 aa8.31□□□□□ -1.08
snR78snR78 RSA3Q05942 220 aaKnown RBP8.31□□□□□ -1.08
snR78snR78 AOS1Q06624 347 aa8.31□□□□□ -1.08
snR78snR78 SEG2P34250 1132 aa8.3□□□□□ -1.08
snR78snR78 RDH54P38086 958 aa8.3□□□□□ -1.08
snR78snR78 ELM1P32801 640 aa8.29□□□□□ -1.08
snR78snR78 PTC7P38797 343 aa8.29□□□□□ -1.08
snR78snR78 HRK1Q08732 759 aaKnown RBP8.29□□□□□ -1.08
snR78snR78 MGE1P38523 228 aa8.28□□□□□ -1.08
snR78snR78 MRPS18P42847 217 aa8.28□□□□□ -1.08
snR78snR78 RKM2Q03942 479 aa8.28□□□□□ -1.08
snR78snR78 HEM13P11353 328 aaKnown RBP8.27□□□□□ -1.09
snR78snR78 PIC2P40035 300 aa8.27□□□□□ -1.09
snR78snR78 GTS1P40956 396 aa8.27□□□□□ -1.09
snR78snR78 POL32P47110 350 aa8.27□□□□□ -1.09
snR78snR78 YGR122WP53272 402 aa8.27□□□□□ -1.09
snR78snR78 YML020WQ03722 664 aa8.27□□□□□ -1.09
snR78snR78 EST2Q06163 884 aa8.27□□□□□ -1.09
snR78snR78 SEC23P15303 768 aaKnown RBP8.26□□□□□ -1.09
snR78snR78 YHL012WP38709 493 aa8.26□□□□□ -1.09
snR78snR78 QNS1P38795 714 aaKnown RBP8.26□□□□□ -1.09
snR78snR78 MCD1Q12158 566 aa8.26□□□□□ -1.09
snR78snR78 RNQ1P25367 405 aa8.25□□□□□ -1.09
snR78snR78 ORC3P54790 616 aa8.25□□□□□ -1.09
snR78snR78 PRE9P23638 258 aaKnown RBP8.24□□□□□ -1.09
snR78snR78 VPS53P47061 822 aa8.24□□□□□ -1.09
snR78snR78 LPX1Q12405 387 aaKnown RBP8.24□□□□□ -1.09
snR78snR78 DED1P06634 604 aaKnown RBP8.23□□□□□ -1.09
snR78snR78 MDL2P33311 773 aa8.22□□□□□ -1.09
snR78snR78 RPS26AP39938 119 aaKnown RBP8.22□□□□□ -1.09
snR78snR78 RPS26BP39939 119 aaKnown RBP8.22□□□□□ -1.09
snR78snR78 YJL045WP47052 634 aa8.22□□□□□ -1.09
snR78snR78 RAD2P07276 1031 aa8.21□□□□□ -1.1
snR78snR78 SAM35P14693 329 aa8.21□□□□□ -1.1
snR78snR78 NIT1P40447 199 aa8.21□□□□□ -1.1
snR78snR78 TAF13P11747 167 aa8.2□□□□□ -1.1
snR78snR78 ATE1P16639 503 aa8.2□□□□□ -1.1
snR78snR78 GAS1P22146 559 aaKnown RBP8.2□□□□□ -1.1
snR78snR78 PRP43P53131 767 aaKnown RBP8.2□□□□□ -1.1
snR78snR78 PTC5Q12511 572 aa8.2□□□□□ -1.1
snR78snR78 CYC8P14922 966 aa8.19□□□□□ -1.1
snR78snR78 HEM3P28789 327 aa8.19□□□□□ -1.1
snR78snR78 MCM2P29469 868 aa8.19□□□□□ -1.1
snR78snR78 UBP5P39944 805 aa8.19□□□□□ -1.1
snR78snR78 AFG2P32794 780 aa8.18□□□□□ -1.1
snR78snR78 FOL2P51601 243 aaKnown RBP8.18□□□□□ -1.1
snR78snR78 HDA2Q06629 674 aa8.18□□□□□ -1.1
snR78snR78 SRO9P25567 434 aaKnown RBP8.17□□□□□ -1.1
snR78snR78 KIP1P28742 1111 aa8.17□□□□□ -1.1
snR78snR78 YSC84P32793 468 aa8.17□□□□□ -1.1
snR78snR78 UBP3Q01477 912 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
snR78snR78 NOP8Q08287 484 aaPredicted RBP8.17□□□□□ -1.1
snR78snR78 AIM26P32858 118 aa8.16□□□□□ -1.1
snR78snR78 ALG3P38179 458 aa8.15□□□□□ -1.1
snR78snR78 YJR107WP47145 328 aa8.15□□□□□ -1.1
snR78snR78 ROD1Q02805 837 aa8.15□□□□□ -1.1
snR78snR78 SPR28Q04921 423 aa8.14□□□□□ -1.11
snR78snR78 NBA1Q08229 501 aaKnown RBP8.14□□□□□ -1.11
snR78snR78 SEC8P32855 1065 aa8.13□□□□□ -1.11
snR78snR78 ETP1P38748 585 aaKnown RBP8.13□□□□□ -1.11
snR78snR78 GPB2P39717 880 aa8.13□□□□□ -1.11
snR78snR78 CDA2Q06703 312 aa8.13□□□□□ -1.11
snR78snR78 MRL1Q06815 381 aa8.13□□□□□ -1.11
snR78snR78 COQ4O13525 335 aa8.12□□□□□ -1.11
snR78snR78 SIW14P53965 281 aa8.12□□□□□ -1.11
snR78snR78 RRP15Q06511 250 aaPredicted RBP8.12□□□□□ -1.11
snR78snR78 RSC58Q07979 502 aa8.12□□□□□ -1.11
snR78snR78 PEP7P32609 515 aa8.11□□□□□ -1.11
snR78snR78 TSA1P34760 196 aaKnown RBP8.11□□□□□ -1.11
snR78snR78 RAT1Q02792 1006 aaKnown RBP8.11□□□□□ -1.11
snR78snR78 HOS3Q02959 697 aaKnown RBP8.11□□□□□ -1.11
snR78snR78 MKK2P32491 506 aa8.1□□□□□ -1.11
snR78snR78 FYV10P40492 516 aa8.1□□□□□ -1.11
snR78snR78 TNA1P53322 534 aa8.1□□□□□ -1.11
snR78snR78 MRPL22P53881 309 aa8.1□□□□□ -1.11
snR78snR78 RCL1Q08096 367 aaPredicted RBP8.1□□□□□ -1.11
snR78snR78 GCR1P07261 785 aa8.09□□□□□ -1.11
snR78snR78 CCZ1P38273 704 aa8.09□□□□□ -1.11
snR78snR78 ENT3P47160 408 aa8.09□□□□□ -1.11
snR78snR78 ESF1Q06344 628 aaKnown RBP8.09□□□□□ -1.11
snR78snR78 YPL260WQ08977 551 aa8.09□□□□□ -1.11
snR78snR78 YDL177CQ12257 170 aa8.09□□□□□ -1.11
snR78snR78 SPO21Q12411 609 aa8.09□□□□□ -1.11
snR78snR78 SPS1P08458 490 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms