RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C TY1A-ER1P0CX71 440 aa9.04□□□□□ -0.96
YTH1YPR107C TY1A-LR2P0CX72 440 aa9.04□□□□□ -0.96
YTH1YPR107C TY1A-PLP0CX73 440 aa9.04□□□□□ -0.96
YTH1YPR107C TY1A-JR1P0CX74 440 aa9.04□□□□□ -0.96
YTH1YPR107C TY1A-LR3P0CX75 440 aa9.04□□□□□ -0.96
YTH1YPR107C TY1A-ML2P0CX76 440 aa9.04□□□□□ -0.96
YTH1YPR107C SYP1P25623 870 aaKnown RBP9.04□□□□□ -0.96
YTH1YPR107C RPL8BP29453 256 aaKnown RBP9.04□□□□□ -0.96
YTH1YPR107C TIM23P32897 222 aa9.04□□□□□ -0.96
YTH1YPR107C PIN4P34217 668 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
YTH1YPR107C UTP5Q04177 643 aaKnown RBP9.04□□□□□ -0.96
YTH1YPR107C YLR225CQ05948 407 aaKnown RBP9.04□□□□□ -0.96
YTH1YPR107C LCB5Q06147 687 aaKnown RBP9.04□□□□□ -0.96
YTH1YPR107C FMP25Q08023 583 aa9.04□□□□□ -0.96
YTH1YPR107C TY1A-GR1Q12085 440 aa9.04□□□□□ -0.96
YTH1YPR107C TY1A-PR3Q6Q5H1 440 aaKnown RBP9.04□□□□□ -0.96
YTH1YPR107C TY1A-OLQ92392 440 aaKnown RBP9.04□□□□□ -0.96
YTH1YPR107C DED1P06634 604 aaKnown RBP9.03□□□□□ -0.96
YTH1YPR107C INO1P11986 533 aa9.03□□□□□ -0.96
YTH1YPR107C STE5P32917 917 aa9.03□□□□□ -0.96
YTH1YPR107C SEA4P38164 1038 aa9.03□□□□□ -0.96
YTH1YPR107C NEM1P38757 446 aa9.03□□□□□ -0.96
YTH1YPR107C GCV1P48015 400 aa9.03□□□□□ -0.96
YTH1YPR107C SPO71Q03868 1245 aa9.03□□□□□ -0.96
YTH1YPR107C SYT1Q06836 1226 aa9.03□□□□□ -0.96
YTH1YPR107C CIT1P00890 479 aa9.02□□□□□ -0.97
YTH1YPR107C SBP1P10080 294 aaKnown RBP9.02□□□□□ -0.97
YTH1YPR107C PRP9P19736 530 aaKnown RBP9.02□□□□□ -0.97
YTH1YPR107C MNN1P39106 762 aa9.02□□□□□ -0.97
YTH1YPR107C YGL081WP53156 320 aa9.02□□□□□ -0.97
YTH1YPR107C TIF35Q04067 274 aaKnown RBP9.02□□□□□ -0.97
YTH1YPR107C EAF1Q06337 982 aa9.02□□□□□ -0.97
YTH1YPR107C DBP5P20449 482 aaKnown RBP9.01□□□□□ -0.97
YTH1YPR107C YKL107WP34251 309 aa9.01□□□□□ -0.97
YTH1YPR107C HUL4P40985 892 aa9.01□□□□□ -0.97
YTH1YPR107C SLS1P42900 643 aa9.01□□□□□ -0.97
YTH1YPR107C CNN1P43618 361 aa9.01□□□□□ -0.97
YTH1YPR107C MEC3Q02574 474 aa9.01□□□□□ -0.97
YTH1YPR107C YDR444WQ04093 687 aa9.01□□□□□ -0.97
YTH1YPR107C SLP1Q12232 587 aa9.01□□□□□ -0.97
YTH1YPR107C YLL054CQ12244 843 aa9.01□□□□□ -0.97
YTH1YPR107C YGR161W-CQ3E744 92 aa9.01□□□□□ -0.97
YTH1YPR107C ARE1P25628 610 aa9□□□□□ -0.97
YTH1YPR107C UTP8P53276 713 aaKnown RBP9□□□□□ -0.97
YTH1YPR107C SOK2P53438 785 aaPredicted RBP9□□□□□ -0.97
YTH1YPR107C ESC2Q06340 456 aa9□□□□□ -0.97
YTH1YPR107C THI4P32318 326 aa8.99□□□□□ -0.97
YTH1YPR107C MOT2P34909 587 aaKnown RBP8.99□□□□□ -0.97
YTH1YPR107C HNT2P49775 206 aa8.99□□□□□ -0.97
YTH1YPR107C PFD1P46988 109 aa8.98□□□□□ -0.97
YTH1YPR107C CAN1P04817 590 aa8.97□□□□□ -0.97
YTH1YPR107C MET22P32179 357 aa8.97□□□□□ -0.97
YTH1YPR107C MCM7P38132 845 aa8.97□□□□□ -0.97
YTH1YPR107C GIP2P40036 548 aa8.97□□□□□ -0.97
YTH1YPR107C MSH4P40965 878 aaPredicted RBP8.97□□□□□ -0.97
YTH1YPR107C RAT1Q02792 1006 aaKnown RBP8.97□□□□□ -0.97
YTH1YPR107C SRC1Q03707 834 aa8.97□□□□□ -0.97
YTH1YPR107C LAP2Q10740 671 aa8.97□□□□□ -0.97
YTH1YPR107C RGD1P38339 666 aa8.96□□□□□ -0.98
YTH1YPR107C REI1P38344 393 aaPredicted RBP8.96□□□□□ -0.98
YTH1YPR107C PAN5P38787 379 aa8.96□□□□□ -0.98
YTH1YPR107C YGL176CP46945 554 aa8.96□□□□□ -0.98
YTH1YPR107C KNS1P32350 737 aaPredicted RBP8.95□□□□□ -0.98
YTH1YPR107C HSE1P38753 452 aa8.95□□□□□ -0.98
YTH1YPR107C ACO2P39533 789 aa8.95□□□□□ -0.98
YTH1YPR107C AOS1Q06624 347 aa8.95□□□□□ -0.98
YTH1YPR107C SAC7P17121 654 aa8.94□□□□□ -0.98
YTH1YPR107C YIR007WP40566 764 aa8.94□□□□□ -0.98
YTH1YPR107C ALR2P43553 858 aa8.94□□□□□ -0.98
YTH1YPR107C TPO2P53283 614 aa8.94□□□□□ -0.98
YTH1YPR107C GIS4Q04233 774 aa8.94□□□□□ -0.98
YTH1YPR107C YDL124WQ07551 312 aaKnown RBP8.94□□□□□ -0.98
YTH1YPR107C PDC5P16467 563 aaKnown RBP8.93□□□□□ -0.98
YTH1YPR107C TSR4P25040 408 aa8.93□□□□□ -0.98
YTH1YPR107C PUF4P25339 888 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98 RIP-Chip
YTH1YPR107C YAR028WP39548 234 aa8.93□□□□□ -0.98
YTH1YPR107C MPH1P40562 993 aa8.93□□□□□ -0.98
YTH1YPR107C VPS53P47061 822 aa8.93□□□□□ -0.98
YTH1YPR107C TAF8Q03750 510 aa8.93□□□□□ -0.98
YTH1YPR107C AVO1Q08236 1176 aa8.93□□□□□ -0.98
YTH1YPR107C ERR1P0CX10 437 aa8.92□□□□□ -0.98
YTH1YPR107C ERR2P0CX11 437 aa8.92□□□□□ -0.98
YTH1YPR107C AFG2P32794 780 aa8.92□□□□□ -0.98
YTH1YPR107C ALG3P38179 458 aa8.92□□□□□ -0.98
YTH1YPR107C POL5P39985 1022 aaKnown RBP8.92□□□□□ -0.98
YTH1YPR107C YNR063WP53749 607 aa8.92□□□□□ -0.98
YTH1YPR107C YMR074CQ04773 145 aa8.92□□□□□ -0.98
YTH1YPR107C GNT1Q12096 491 aa8.92□□□□□ -0.98
YTH1YPR107C PTC5Q12511 572 aa8.92□□□□□ -0.98
YTH1YPR107C CDC11P32458 415 aa8.91□□□□□ -0.98
YTH1YPR107C YJR142WP47173 342 aa8.91□□□□□ -0.98
YTH1YPR107C UBX5Q06682 500 aa8.91□□□□□ -0.98
YTH1YPR107C ELG1Q12050 791 aa8.91□□□□□ -0.98
YTH1YPR107C YPL066WQ12194 479 aa8.91□□□□□ -0.98
YTH1YPR107C GPM1P00950 247 aaKnown RBP8.9□□□□□ -0.98
YTH1YPR107C NAR1P23503 491 aaKnown RBP8.9□□□□□ -0.98
YTH1YPR107C TED1P40533 473 aa8.9□□□□□ -0.98
YTH1YPR107C SPO74P45819 413 aa8.9□□□□□ -0.98
YTH1YPR107C ALG14P38242 237 aa8.89□□□□□ -0.99
YTH1YPR107C MBP1P39678 833 aa8.89□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms