RNA–Protein interactions for RNA: YNR070W

PDR18, Transcript of Putative transporter of the ATP-binding cassette (ABC) family, yeast

Gene PDR18, Length 4,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR18	YNR070W	CTT1	P06115	562 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	YKL222C	P35995	705 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	RTT107	P38850	1070 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
PDR18	YNR070W	UBP15	P50101	1230 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	PEX29	Q03370	554 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	YPR078C	Q06813	372 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	SPO21	Q12411	609 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	LYS2	P07702	1392 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	GAL2	P13181	574 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	LTV1	P34078	463 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	PSY2	P40164	858 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	TCB2	P48231	1178 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	VPS75	P53853	264 aa		6.57	□□□□□ -1.36
PDR18	YNR070W	GET3	Q12154	354 aa	Known RBP	6.57	□□□□□ -1.36
PDR18	YNR070W	IRC20	Q06554	1556 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	SWI4	P25302	1093 aa	Known RBP	6.56	□□□□□ -1.36
PDR18	YNR070W	EFB1	P32471	206 aa	Known RBP	6.56	□□□□□ -1.36
PDR18	YNR070W	YKR018C	P36114	725 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	SBE2	P42223	864 aa	Known RBP	6.56	□□□□□ -1.36
PDR18	YNR070W	RPC17	P47076	161 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	CWC22	P53333	577 aa	Known RBP	6.56	□□□□□ -1.36
PDR18	YNR070W	VPS72	Q03388	795 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	YDR306C	Q06640	478 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
PDR18	YNR070W	MAK31	P23059	88 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	EMP47	P43555	445 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	YML082W	Q04533	649 aa	Known RBP	6.56	□□□□□ -1.36
PDR18	YNR070W	COQ1	P18900	473 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-LR1	P0C2J3	1770 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-F	P0CX63	1770 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-GR2	P0CX64	1770 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-C	P25384	1770 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-DR2	Q03494	1770 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY1B-DR1	Q03855	1755 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-DR3	Q07791	1770 aa	Known RBP	6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-OR1	Q12113	1770 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-DR1	Q12472	1770 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	TY2B-OR2	Q12501	1770 aa		6.56	□□□□□ -1.36
PDR18	YNR070W	KAR3	P17119	729 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	ADP1	P25371	1049 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	GEF1	P37020	779 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	ISW1	P38144	1129 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	CTM1	P38818	585 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	MAK16	P10962	306 aa	Predicted RBP	6.55	□□□□□ -1.36
PDR18	YNR070W	MRE11	P32829	692 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	NFU1	P32860	256 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	CBR1	P38626	284 aa	Known RBP	6.55	□□□□□ -1.36
PDR18	YNR070W	LYS14	P40971	790 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	PSP2	P50109	593 aa	Known RBP	6.55	□□□□□ -1.36
PDR18	YNR070W	SMC5	Q08204	1093 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	HAP1	P0CE41	1502 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	POL3	P15436	1097 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	ASE1	P50275	885 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	UME1	Q03010	460 aa		6.55	□□□□□ -1.36
PDR18	YNR070W	NOP14	Q99207	810 aa	Known RBP	6.55	□□□□□ -1.36
PDR18	YNR070W	SMY1	P32364	656 aa	Known RBP	6.54	□□□□□ -1.36
PDR18	YNR070W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
PDR18	YNR070W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
PDR18	YNR070W	RXT2	P38255	430 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	VAB2	P40003	282 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	RGD2	P43556	714 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	VPS38	Q05919	439 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	MMR1	Q06324	491 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	UTP4	Q06679	776 aa	Known RBP	6.54	□□□□□ -1.36
PDR18	YNR070W	CRD1	Q07560	283 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	YDR090C	Q03193	310 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	MPC54	Q08550	464 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	CYB2	P00175	591 aa		6.54	□□□□□ -1.36
PDR18	YNR070W	DIP2	Q12220	943 aa	Predicted RBP	6.54	□□□□□ -1.36
PDR18	YNR070W	CDC16	P09798	840 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	ATE1	P16639	503 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	KRE2	P27809	442 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	CCL1	P37366	393 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	PFF1	P38244	976 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	ALT2	P52892	507 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	ZPR1	P53303	486 aa	Known RBP	6.53	□□□□□ -1.36
PDR18	YNR070W	RPO21	P04050	1733 aa	Known RBP	6.53	□□□□□ -1.36
PDR18	YNR070W	ERG12	P07277	443 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	PTH2	P34222	208 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	YEL1	P34225	687 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	SEC27	P41811	889 aa	Known RBP	6.53	□□□□□ -1.36
PDR18	YNR070W	VIP1	Q06685	1146 aa	Known RBP	6.53	□□□□□ -1.36
PDR18	YNR070W	RAD61	Q99359	647 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	MATALPHA2	P0CY08	210 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	HMLALPHA2	P0CY09	210 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	PEX5	P35056	612 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	SUL1	P38359	859 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	TOM71	P38825	639 aa	Known RBP	6.53	□□□□□ -1.36
PDR18	YNR070W	ACF4	P47129	309 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	HOP2	P53187	214 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	ATG23	Q06671	453 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	LRE1	P25579	583 aa	Known RBP	6.53	□□□□□ -1.36
PDR18	YNR070W	SAK1	P38990	1142 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	YGL140C	P53120	1219 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	WAR1	Q03631	944 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	YLR455W	Q06188	304 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	RGA2	Q06407	1009 aa		6.53	□□□□□ -1.36
PDR18	YNR070W	KIC1	P38692	1080 aa		6.52	□□□□□ -1.37
PDR18	YNR070W	SEC9	P40357	651 aa		6.52	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms