RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C CCT8P47079 568 aaKnown RBP1.15□□□□□ -2.22
RKR1YMR247C YNL058CP53947 316 aa1.15□□□□□ -2.22
RKR1YMR247C RSA3Q05942 220 aaKnown RBP1.15□□□□□ -2.22
RKR1YMR247C HXK1P04806 485 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C RAD2P07276 1031 aa1.15□□□□□ -2.23
RKR1YMR247C YHL012WP38709 493 aa1.15□□□□□ -2.23
RKR1YMR247C MDJ2P42834 146 aa1.15□□□□□ -2.23
RKR1YMR247C DAM1P53267 343 aa1.15□□□□□ -2.23
RKR1YMR247C REC8Q12188 680 aa1.15□□□□□ -2.23
RKR1YMR247C CMR1Q12510 522 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C CDC34P14682 295 aa1.15□□□□□ -2.23
RKR1YMR247C NAR1P23503 491 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C GAR1P28007 205 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C LYP1P32487 611 aa1.15□□□□□ -2.23
RKR1YMR247C ISF1P32488 338 aa1.15□□□□□ -2.23
RKR1YMR247C QNS1P38795 714 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C RRP8P38961 392 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C YGR053CP53234 283 aa1.15□□□□□ -2.23
RKR1YMR247C PAP2P53632 584 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C YML020WQ03722 664 aa1.15□□□□□ -2.23
RKR1YMR247C DOT1Q04089 582 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C MNL2Q12205 849 aa1.15□□□□□ -2.23
RKR1YMR247C TY1A-NL1Q12391 440 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C PRP6P19735 899 aaPredicted RBP1.15□□□□□ -2.23
RKR1YMR247C NFS1P25374 497 aa1.15□□□□□ -2.23
RKR1YMR247C YHL050CP38721 697 aa1.15□□□□□ -2.23
RKR1YMR247C PAN5P38787 379 aa1.15□□□□□ -2.23
RKR1YMR247C ERP5P38819 212 aa1.15□□□□□ -2.23
RKR1YMR247C YHR219WP38900 624 aa1.15□□□□□ -2.23
RKR1YMR247C YAP1802P53309 568 aa1.15□□□□□ -2.23
RKR1YMR247C RCM1P53972 490 aa1.15□□□□□ -2.23
RKR1YMR247C NAM8Q00539 523 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C NAN1Q02931 896 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C RSM24Q03976 319 aa1.15□□□□□ -2.23
RKR1YMR247C RGA2Q06407 1009 aa1.15□□□□□ -2.23
RKR1YMR247C HDA2Q06629 674 aa1.15□□□□□ -2.23
RKR1YMR247C REH1Q06709 432 aa1.15□□□□□ -2.23
RKR1YMR247C NOP12Q08208 459 aaKnown RBP1.15□□□□□ -2.23
RKR1YMR247C YDR215CQ12240 137 aa1.15□□□□□ -2.23
RKR1YMR247C ADE8P04161 214 aa1.14□□□□□ -2.23
RKR1YMR247C RPS4AP0CX35 261 aaKnown RBP1.14□□□□□ -2.23
RKR1YMR247C RPS4BP0CX36 261 aaKnown RBP1.14□□□□□ -2.23
RKR1YMR247C HSF1P10961 833 aa1.14□□□□□ -2.23
RKR1YMR247C GSY1P23337 708 aa1.14□□□□□ -2.23
RKR1YMR247C KTR4P38131 464 aa1.14□□□□□ -2.23
RKR1YMR247C EXO5P38289 585 aa1.14□□□□□ -2.23
RKR1YMR247C RRM3P38766 723 aa1.14□□□□□ -2.23
RKR1YMR247C BOL3P39724 118 aa1.14□□□□□ -2.23
RKR1YMR247C AIR1P40507 360 aaKnown RBP1.14□□□□□ -2.23
RKR1YMR247C IRR1P40541 1150 aa1.14□□□□□ -2.23
RKR1YMR247C RSM26P47141 266 aa1.14□□□□□ -2.23
RKR1YMR247C NIT3P49954 291 aa1.14□□□□□ -2.23
RKR1YMR247C YGL140CP53120 1219 aa1.14□□□□□ -2.23
RKR1YMR247C YMR074CQ04773 145 aa1.14□□□□□ -2.23
RKR1YMR247C PUS7Q08647 676 aaKnown RBP1.14□□□□□ -2.23
RKR1YMR247C HAT1Q12341 374 aa1.14□□□□□ -2.23
RKR1YMR247C TY1A-DR3Q12441 440 aa1.14□□□□□ -2.23
RKR1YMR247C CYC8P14922 966 aa1.14□□□□□ -2.23
RKR1YMR247C STI1P15705 589 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
RKR1YMR247C SYP1P25623 870 aaKnown RBP1.14□□□□□ -2.23
RKR1YMR247C NMD2P38798 1089 aaKnown RBP1.14□□□□□ -2.23
RKR1YMR247C PEX28P38848 579 aa1.14□□□□□ -2.23
RKR1YMR247C ERP6P53198 216 aa1.14□□□□□ -2.23
RKR1YMR247C TIM44Q01852 431 aa1.14□□□□□ -2.23
RKR1YMR247C EST2Q06163 884 aa1.14□□□□□ -2.23
RKR1YMR247C INP54Q08227 384 aaKnown RBP1.14□□□□□ -2.23
RKR1YMR247C RSB1Q08417 382 aa1.14□□□□□ -2.23
RKR1YMR247C TRE1Q08919 783 aa1.14□□□□□ -2.23
RKR1YMR247C SPS1P08458 490 aa1.14□□□□□ -2.23
RKR1YMR247C SEC8P32855 1065 aa1.14□□□□□ -2.23
RKR1YMR247C DLD1P32891 587 aa1.14□□□□□ -2.23
RKR1YMR247C GRS1P38088 690 aaKnown RBP1.14□□□□□ -2.23
RKR1YMR247C POL32P47110 350 aa1.14□□□□□ -2.23
RKR1YMR247C GYP7P48365 746 aa1.14□□□□□ -2.23
RKR1YMR247C ULP1Q02724 621 aa1.14□□□□□ -2.23
RKR1YMR247C YDR344CQ05510 147 aa1.14□□□□□ -2.23
RKR1YMR247C YPL277CQ08989 487 aa1.14□□□□□ -2.23
RKR1YMR247C SBP1P10080 294 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C SPC42P36094 363 aa1.13□□□□□ -2.23
RKR1YMR247C SSP120P39931 234 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C MAD1P40957 749 aa1.13□□□□□ -2.23
RKR1YMR247C YFL066CP43538 392 aa1.13□□□□□ -2.23
RKR1YMR247C SUT1P53032 299 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C YNR065CP53751 1116 aa1.13□□□□□ -2.23
RKR1YMR247C FOX2Q02207 900 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C SGD1Q06132 899 aa1.13□□□□□ -2.23
RKR1YMR247C RRP15Q06511 250 aaPredicted RBP1.13□□□□□ -2.23
RKR1YMR247C RXT3Q07458 294 aa1.13□□□□□ -2.23
RKR1YMR247C THI72Q08579 599 aa1.13□□□□□ -2.23
RKR1YMR247C TUF1P02992 437 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C GAL11P19659 1081 aa1.13□□□□□ -2.23
RKR1YMR247C YSC84P32793 468 aa1.13□□□□□ -2.23
RKR1YMR247C MAC1P35192 417 aa1.13□□□□□ -2.23
RKR1YMR247C MET12P46151 657 aa1.13□□□□□ -2.23
RKR1YMR247C GUS1P46655 708 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
RKR1YMR247C AMA1P50082 593 aa1.13□□□□□ -2.23
RKR1YMR247C MNN10P50108 393 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C NOG2P53742 486 aaKnown RBP1.13□□□□□ -2.23
RKR1YMR247C LCD1Q04377 747 aa1.13□□□□□ -2.23
RKR1YMR247C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms