RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C PIN2Q12057 282 aa5.85□□□□□ -1.47
EAR1YMR171C MAD1P40957 749 aa5.85□□□□□ -1.47
EAR1YMR171C SOG2Q08817 791 aa5.85□□□□□ -1.47
EAR1YMR171C PRS1P32895 427 aaKnown RBP5.84□□□□□ -1.47
EAR1YMR171C YNR065CP53751 1116 aa5.84□□□□□ -1.47
EAR1YMR171C YSP2Q06681 1438 aa5.84□□□□□ -1.48
EAR1YMR171C YLR419WQ06698 1435 aaKnown RBP5.84□□□□□ -1.48
EAR1YMR171C SEC7P11075 2009 aaKnown RBP5.83□□□□□ -1.48
EAR1YMR171C PDC5P16467 563 aaKnown RBP5.83□□□□□ -1.48
EAR1YMR171C MNR2P35724 969 aa5.83□□□□□ -1.48
EAR1YMR171C LSB6P42951 607 aa5.83□□□□□ -1.48
EAR1YMR171C RSM26P47141 266 aa5.83□□□□□ -1.48
EAR1YMR171C GPM1P00950 247 aaKnown RBP5.82□□□□□ -1.48
EAR1YMR171C CLN2P20438 545 aa5.82□□□□□ -1.48
EAR1YMR171C SQT1P35184 431 aa5.82□□□□□ -1.48
EAR1YMR171C ALD6P54115 500 aaKnown RBP5.82□□□□□ -1.48
EAR1YMR171C TY3B-IQ7LHG5 1498 aaKnown RBP5.82□□□□□ -1.48
EAR1YMR171C KNS1P32350 737 aaPredicted RBP5.82□□□□□ -1.48
EAR1YMR171C FET4P40988 552 aa5.82□□□□□ -1.48
EAR1YMR171C JJJ3P47138 172 aa5.82□□□□□ -1.48
EAR1YMR171C ORC1P54784 914 aaPredicted RBP5.82□□□□□ -1.48
EAR1YMR171C NOG1Q02892 647 aaKnown RBP5.82□□□□□ -1.48
EAR1YMR171C DNF2Q12675 1612 aa5.81□□□□□ -1.48
EAR1YMR171C SCT1P32784 759 aa5.81□□□□□ -1.48
EAR1YMR171C PEX28P38848 579 aa5.81□□□□□ -1.48
EAR1YMR171C VAC8P39968 578 aa5.81□□□□□ -1.48
EAR1YMR171C PEX13P80667 386 aa5.81□□□□□ -1.48
EAR1YMR171C GBP2P25555 427 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
EAR1YMR171C NEO1P40527 1151 aa5.8□□□□□ -1.48
EAR1YMR171C GUP1P53154 560 aa5.8□□□□□ -1.48
EAR1YMR171C SOK2P53438 785 aaPredicted RBP5.8□□□□□ -1.48
EAR1YMR171C HAS1Q03532 505 aaKnown RBP5.8□□□□□ -1.48
EAR1YMR171C HPF1Q05164 967 aa5.8□□□□□ -1.48
EAR1YMR171C BNR1P40450 1375 aa5.79□□□□□ -1.48
EAR1YMR171C GCR1P07261 785 aa5.79□□□□□ -1.48
EAR1YMR171C HTS1P07263 546 aaKnown RBP5.79□□□□□ -1.48
EAR1YMR171C NAR1P23503 491 aaKnown RBP5.79□□□□□ -1.48
EAR1YMR171C MSH3P25336 1018 aa5.79□□□□□ -1.48
EAR1YMR171C XKS1P42826 600 aa5.79□□□□□ -1.48
EAR1YMR171C YGL140CP53120 1219 aa5.79□□□□□ -1.48
EAR1YMR171C CDC34P14682 295 aa5.79□□□□□ -1.48
EAR1YMR171C DUT1P33317 147 aa5.79□□□□□ -1.48
EAR1YMR171C SHU2P38957 223 aa5.79□□□□□ -1.48
EAR1YMR171C GIS4Q04233 774 aa5.79□□□□□ -1.48
EAR1YMR171C RAV1P47104 1357 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-LR4P0C2I8 440 aaKnown RBP5.78□□□□□ -1.48
EAR1YMR171C TY1A-DR6P0CX70 440 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-ER1P0CX71 440 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-LR2P0CX72 440 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-PLP0CX73 440 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-JR1P0CX74 440 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-LR3P0CX75 440 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-ML2P0CX76 440 aa5.78□□□□□ -1.48
EAR1YMR171C HEM13P11353 328 aaKnown RBP5.78□□□□□ -1.48
EAR1YMR171C SEC23P15303 768 aaKnown RBP5.78□□□□□ -1.48
EAR1YMR171C EXO5P38289 585 aa5.78□□□□□ -1.48
EAR1YMR171C LEM3P42838 414 aa5.78□□□□□ -1.48
EAR1YMR171C CWC24P53769 259 aa5.78□□□□□ -1.48
EAR1YMR171C MRL1Q06815 381 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-GR1Q12085 440 aa5.78□□□□□ -1.48
EAR1YMR171C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.78□□□□□ -1.48
EAR1YMR171C TY1A-OLQ92392 440 aaKnown RBP5.78□□□□□ -1.48
EAR1YMR171C MLP1Q02455 1875 aaKnown RBP5.78□□□□□ -1.48
EAR1YMR171C PGM2P37012 569 aaKnown RBP5.77□□□□□ -1.49
EAR1YMR171C GIP2P40036 548 aa5.77□□□□□ -1.49
EAR1YMR171C DPH6Q12429 685 aa5.77□□□□□ -1.49
EAR1YMR171C RTC1Q08281 1341 aa5.76□□□□□ -1.49
EAR1YMR171C YKL077WP36081 392 aa5.76□□□□□ -1.49
EAR1YMR171C ALG14P38242 237 aa5.76□□□□□ -1.49
EAR1YMR171C OCA5P38738 679 aa5.76□□□□□ -1.49
EAR1YMR171C TED1P40533 473 aa5.76□□□□□ -1.49
EAR1YMR171C FAA4P47912 694 aaKnown RBP5.76□□□□□ -1.49
EAR1YMR171C GNP1P48813 663 aa5.76□□□□□ -1.49
EAR1YMR171C YGR035CP53222 116 aa5.76□□□□□ -1.49
EAR1YMR171C GDE1Q02979 1223 aa5.76□□□□□ -1.49
EAR1YMR171C PDS5Q04264 1277 aa5.76□□□□□ -1.49
EAR1YMR171C RTT10Q08924 1013 aa5.76□□□□□ -1.49
EAR1YMR171C YIG1Q08956 461 aa5.76□□□□□ -1.49
EAR1YMR171C SLP1Q12232 587 aa5.76□□□□□ -1.49
EAR1YMR171C NUP188P52593 1655 aaKnown RBP5.76□□□□□ -1.49
EAR1YMR171C RDH54P38086 958 aa5.75□□□□□ -1.49
EAR1YMR171C PAN5P38787 379 aa5.75□□□□□ -1.49
EAR1YMR171C NNF1P47149 201 aa5.75□□□□□ -1.49
EAR1YMR171C HDA2Q06629 674 aa5.75□□□□□ -1.49
EAR1YMR171C DOP1Q03921 1698 aa5.75□□□□□ -1.49
EAR1YMR171C UTP22P53254 1237 aaPredicted RBP5.75□□□□□ -1.49
EAR1YMR171C SPO71Q03868 1245 aa5.75□□□□□ -1.49
EAR1YMR171C VMR1P38735 1592 aa5.74□□□□□ -1.49
EAR1YMR171C TAF13P11747 167 aa5.74□□□□□ -1.49
EAR1YMR171C ESL2P36168 1195 aa5.74□□□□□ -1.49
EAR1YMR171C YGR053CP53234 283 aa5.74□□□□□ -1.49
EAR1YMR171C SSF2Q12153 453 aaPredicted RBP5.74□□□□□ -1.49
EAR1YMR171C REC8Q12188 680 aa5.74□□□□□ -1.49
EAR1YMR171C IML1P47170 1584 aa5.74□□□□□ -1.49
EAR1YMR171C VMA4P22203 233 aaKnown RBP5.73□□□□□ -1.49
EAR1YMR171C TAF5P38129 798 aa5.73□□□□□ -1.49
EAR1YMR171C NEM1P38757 446 aa5.73□□□□□ -1.49
EAR1YMR171C NHA1Q99271 985 aa5.73□□□□□ -1.49
EAR1YMR171C HXT13P39924 564 aa5.72□□□□□ -1.49
EAR1YMR171C SLS1P42900 643 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms