RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W YKT6P36015 200 aaKnown RBP5.89□□□□□ -1.47
SPG4YMR107W NOC2P39744 710 aaKnown RBP5.89□□□□□ -1.47
SPG4YMR107W SEC5P89102 971 aa5.89□□□□□ -1.47
SPG4YMR107W MAG2Q06436 670 aaKnown RBP5.89□□□□□ -1.47
SPG4YMR107W CIR2Q08822 631 aa5.89□□□□□ -1.47
SPG4YMR107W NUR1Q12066 484 aa5.89□□□□□ -1.47
SPG4YMR107W DCS2Q12123 353 aa5.89□□□□□ -1.47
SPG4YMR107W BNI1P41832 1953 aa5.88□□□□□ -1.47
SPG4YMR107W RPL22AP05749 121 aaKnown RBP5.88□□□□□ -1.47
SPG4YMR107W KEX2P13134 814 aa5.88□□□□□ -1.47
SPG4YMR107W RRP43P25359 394 aaPredicted RBP5.88□□□□□ -1.47
SPG4YMR107W MCX1P38323 520 aaPredicted RBP5.88□□□□□ -1.47
SPG4YMR107W MPH1P40562 993 aa5.88□□□□□ -1.47
SPG4YMR107W ERG5P54781 538 aa5.88□□□□□ -1.47
SPG4YMR107W ZDS2P54786 942 aa5.88□□□□□ -1.47
SPG4YMR107W VAC14Q06708 880 aa5.88□□□□□ -1.47
SPG4YMR107W UTP10P42945 1769 aaKnown RBP5.88□□□□□ -1.47
SPG4YMR107W RPS6AP0CX37 236 aaKnown RBP5.87□□□□□ -1.47
SPG4YMR107W RPS6BP0CX38 236 aaPredicted RBP5.87□□□□□ -1.47
SPG4YMR107W PGI1P12709 554 aaKnown RBP5.87□□□□□ -1.47
SPG4YMR107W DIT2P21595 489 aa5.87□□□□□ -1.47
SPG4YMR107W RAD53P22216 821 aa5.87□□□□□ -1.47
SPG4YMR107W RAD57P25301 460 aa5.87□□□□□ -1.47
SPG4YMR107W URA1P28272 314 aaPredicted RBP5.87□□□□□ -1.47
SPG4YMR107W SEC65P29478 273 aa5.87□□□□□ -1.47
SPG4YMR107W YKR018CP36114 725 aa5.87□□□□□ -1.47
SPG4YMR107W SPT8P38915 602 aa5.87□□□□□ -1.47
SPG4YMR107W XDJ1P39102 459 aa5.87□□□□□ -1.47
SPG4YMR107W UBP12P39538 1254 aa5.87□□□□□ -1.47
SPG4YMR107W SIT1P39980 628 aa5.87□□□□□ -1.47
SPG4YMR107W NDC80P40460 691 aa5.87□□□□□ -1.47
SPG4YMR107W MDJ2P42834 146 aa5.87□□□□□ -1.47
SPG4YMR107W RSC8P43609 557 aaKnown RBP5.87□□□□□ -1.47
SPG4YMR107W TFB2Q02939 513 aa5.87□□□□□ -1.47
SPG4YMR107W INP2Q03824 705 aa5.87□□□□□ -1.47
SPG4YMR107W YPR109WQ06104 294 aa5.87□□□□□ -1.47
SPG4YMR107W HMI1Q12039 706 aa5.87□□□□□ -1.47
SPG4YMR107W LAM4P38800 1345 aa5.87□□□□□ -1.47
SPG4YMR107W PDR18P53756 1333 aa5.86□□□□□ -1.47
SPG4YMR107W TOP1P04786 769 aa5.86□□□□□ -1.47
SPG4YMR107W SPO11P23179 398 aa5.86□□□□□ -1.47
SPG4YMR107W CDC60P26637 1090 aaKnown RBP5.86□□□□□ -1.47
SPG4YMR107W YET1P35723 206 aa5.86□□□□□ -1.47
SPG4YMR107W CIC1P38779 376 aaKnown RBP5.86□□□□□ -1.47
SPG4YMR107W REV7P38927 245 aa5.86□□□□□ -1.47
SPG4YMR107W SEC26P41810 973 aaKnown RBP5.86□□□□□ -1.47
SPG4YMR107W VPS53P47061 822 aa5.86□□□□□ -1.47
SPG4YMR107W HFM1P51979 1187 aa5.86□□□□□ -1.47
SPG4YMR107W CUE3P53137 624 aaKnown RBP5.86□□□□□ -1.47
SPG4YMR107W MLC1P53141 149 aa5.86□□□□□ -1.47
SPG4YMR107W ADA2Q02336 434 aa5.86□□□□□ -1.47
SPG4YMR107W STE20Q03497 939 aaKnown RBP5.86□□□□□ -1.47
SPG4YMR107W ARO80Q04052 950 aa5.86□□□□□ -1.47
SPG4YMR107W OSW1Q08692 278 aa5.86□□□□□ -1.47
SPG4YMR107W LPD1P09624 499 aaKnown RBP5.85□□□□□ -1.47
SPG4YMR107W TPM1P17536 199 aaKnown RBP5.85□□□□□ -1.47
SPG4YMR107W RPL5P26321 297 aaKnown RBP5.85□□□□□ -1.47
SPG4YMR107W NUD1P32336 851 aa5.85□□□□□ -1.47
SPG4YMR107W HXT1P32465 570 aa5.85□□□□□ -1.47
SPG4YMR107W GCG1P32656 232 aaKnown RBP5.85□□□□□ -1.47
SPG4YMR107W ADE17P38009 592 aaKnown RBP5.85□□□□□ -1.47
SPG4YMR107W CAJ1P39101 391 aa5.85□□□□□ -1.47
SPG4YMR107W SHQ1P40486 507 aaPredicted RBP5.85□□□□□ -1.47
SPG4YMR107W AXL1P40851 1208 aa5.85□□□□□ -1.47
SPG4YMR107W PXA1P41909 870 aa5.85□□□□□ -1.47
SPG4YMR107W TRS85P46944 698 aa5.85□□□□□ -1.47
SPG4YMR107W YNR029CP53729 429 aaKnown RBP5.85□□□□□ -1.47
SPG4YMR107W POB3Q04636 552 aaKnown RBP5.85□□□□□ -1.47
SPG4YMR107W TAF9Q05027 157 aa5.85□□□□□ -1.47
SPG4YMR107W AFT2Q08957 416 aa5.85□□□□□ -1.47
SPG4YMR107W NEW1Q08972 1196 aaKnown RBP5.85□□□□□ -1.47
SPG4YMR107W RAD1P06777 1100 aa5.84□□□□□ -1.47
SPG4YMR107W SPO12P17123 173 aa5.84□□□□□ -1.47
SPG4YMR107W CDC10P25342 322 aaKnown RBP5.84□□□□□ -1.47
SPG4YMR107W UGA3P26370 528 aa5.84□□□□□ -1.47
SPG4YMR107W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SPG4YMR107W SRL3P36167 246 aa5.84□□□□□ -1.47
SPG4YMR107W GRX7P38068 203 aa5.84□□□□□ -1.47
SPG4YMR107W EFM2P38347 419 aa5.84□□□□□ -1.47
SPG4YMR107W ATG3P40344 310 aa5.84□□□□□ -1.47
SPG4YMR107W APL6P46682 809 aa5.84□□□□□ -1.47
SPG4YMR107W YGR237CP50089 785 aa5.84□□□□□ -1.47
SPG4YMR107W INP52P50942 1183 aa5.84□□□□□ -1.47
SPG4YMR107W PCL10P53124 433 aa5.84□□□□□ -1.47
SPG4YMR107W ALD3P54114 506 aa5.84□□□□□ -1.47
SPG4YMR107W CTF4Q01454 927 aa5.84□□□□□ -1.47
SPG4YMR107W YPL109CQ02981 657 aa5.84□□□□□ -1.47
SPG4YMR107W LCB5Q06147 687 aaKnown RBP5.84□□□□□ -1.47
SPG4YMR107W MDM38Q08179 573 aa5.84□□□□□ -1.47
SPG4YMR107W SIL1Q08199 421 aa5.84□□□□□ -1.47
SPG4YMR107W YVC1Q12324 675 aa5.84□□□□□ -1.47
SPG4YMR107W OSH2Q12451 1283 aa5.84□□□□□ -1.47
SPG4YMR107W CDC6P09119 513 aa5.83□□□□□ -1.48
SPG4YMR107W CBP3P21560 335 aa5.83□□□□□ -1.48
SPG4YMR107W VPS1P21576 704 aaKnown RBP5.83□□□□□ -1.48
SPG4YMR107W NIP1P32497 812 aaKnown RBP5.83□□□□□ -1.48
SPG4YMR107W CNS1P33313 385 aa5.83□□□□□ -1.48
SPG4YMR107W PIH1P38768 344 aa5.83□□□□□ -1.48
SPG4YMR107W CST6P40535 587 aa5.83□□□□□ -1.48
SPG4YMR107W ARI1P53111 347 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms