RNA–Protein interactions for RNA: YMR086W

SEG1, Transcript of Component of eisosome required for proper eisosome assembly, yeast

Gene SEG1, Length 2,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEG1	YMR086W	MIC60	P36112	540 aa		4.2	□□□□□ -1.74
SEG1	YMR086W	TBS1	P38114	1094 aa		4.2	□□□□□ -1.74
SEG1	YMR086W	SMC2	P38989	1170 aa	Known RBP	4.2	□□□□□ -1.74
SEG1	YMR086W	TOK1	P40310	691 aa		4.2	□□□□□ -1.74
SEG1	YMR086W	UBP10	P53874	792 aa	Predicted RBP	4.2	□□□□□ -1.74
SEG1	YMR086W	NIS1	P53939	407 aa		4.2	□□□□□ -1.74
SEG1	YMR086W	TAF8	Q03750	510 aa		4.2	□□□□□ -1.74
SEG1	YMR086W	CIA1	Q05583	330 aa		4.2	□□□□□ -1.74
SEG1	YMR086W	ATG38	Q05789	226 aa	Known RBP	4.2	□□□□□ -1.74
SEG1	YMR086W	RGA2	Q06407	1009 aa		4.2	□□□□□ -1.74
SEG1	YMR086W	CLC1	P17891	233 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	MAK11	P20484	414 aa	Known RBP	4.19	□□□□□ -1.74
SEG1	YMR086W	RSC6	P25632	483 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	BCD1	P38772	366 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	PEX18	P38855	283 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	NIT1	P40447	199 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	UBA2	P52488	636 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	KXD1	P53158	218 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	HST2	P53686	357 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	YNL247W	P53852	767 aa	Known RBP	4.19	□□□□□ -1.74
SEG1	YMR086W	SSL2	Q00578	843 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	ERO1	Q03103	563 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	CUE5	Q08412	411 aa	Known RBP	4.19	□□□□□ -1.74
SEG1	YMR086W	IKI3	Q06706	1349 aa	Known RBP	4.19	□□□□□ -1.74
SEG1	YMR086W	SSH4	P32343	579 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	KRE6	P32486	720 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	PEX32	P38292	413 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	RIM4	P38741	713 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	POP2	P39008	433 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	ALG2	P43636	503 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	YJR098C	P47139	656 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	MSN5	P52918	1224 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	MAL11	P53048	616 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	TAN1	P53072	289 aa	Predicted RBP	4.19	□□□□□ -1.74
SEG1	YMR086W	YDR338C	Q05497	695 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	SRF1	Q12516	437 aa		4.19	□□□□□ -1.74
SEG1	YMR086W	TMA7	Q3E764	64 aa	Known RBP	4.19	□□□□□ -1.74
SEG1	YMR086W	ADR1	P07248	1323 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	JIP3	O13555	125 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	RIP-Chip
SEG1	YMR086W	LEU1	P07264	779 aa	Known RBP	4.18	□□□□□ -1.74
SEG1	YMR086W	PHO8	P11491	566 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	PLC1	P32383	869 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	RPT5	P33297	434 aa	Known RBP	4.18	□□□□□ -1.74
SEG1	YMR086W	PXA2	P34230	853 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	WHI3	P34761	661 aa	Known RBP	4.18	□□□□□ -1.74
SEG1	YMR086W	YKL050C	P35736	922 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	NCS2	P53923	493 aa	Predicted RBP	4.18	□□□□□ -1.74
SEG1	YMR086W	YOR389W	Q08912	624 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	SPS1	P08458	490 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	HMG1	P12683	1054 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	GRS1	P38088	690 aa	Known RBP	4.18	□□□□□ -1.74
SEG1	YMR086W	JJJ1	P53863	590 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	ERV25	P54837	211 aa	Known RBP	4.18	□□□□□ -1.74
SEG1	YMR086W	REC8	Q12188	680 aa		4.18	□□□□□ -1.74
SEG1	YMR086W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	RIP-Chip
SEG1	YMR086W	DBF20	P32328	564 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	PTR2	P32901	601 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	YKL100C	P34248	587 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	MIF2	P35201	549 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	YKL069W	P36088	180 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	YBR071W	P38243	211 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	YMR124W	P39523	943 aa	Known RBP	4.17	□□□□□ -1.74
SEG1	YMR086W	RSM25	P40496	264 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	GPD2	P41911	440 aa	Known RBP	4.17	□□□□□ -1.74
SEG1	YMR086W	PCL10	P53124	433 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	NPY1	P53164	384 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	MET14	Q02196	202 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	TRS130	Q03660	1102 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	VMS1	Q04311	632 aa	Known RBP	4.17	□□□□□ -1.74
SEG1	YMR086W	LCD1	Q04377	747 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	CYT1	P07143	309 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	RAD16	P31244	790 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	LSB1	P53281	241 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	MEP3	P53390	489 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	ARA2	Q04212	335 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	NSI1	Q12457	570 aa		4.17	□□□□□ -1.74
SEG1	YMR086W	SEC3	P33332	1336 aa	Known RBP	4.17	□□□□□ -1.74
SEG1	YMR086W	MET8	P15807	274 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	PUP2	P32379	260 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	COY1	P34237	679 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	YKR023W	P36119	530 aa	Known RBP	4.16	□□□□□ -1.74
SEG1	YMR086W	GPP2	P40106	250 aa	Known RBP	4.16	□□□□□ -1.74
SEG1	YMR086W	YIL166C	P40445	542 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	TMA108	P40462	946 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	PKP1	P40530	394 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	YGR266W	P53326	701 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	PRO2	P54885	456 aa	Known RBP	4.16	□□□□□ -1.74
SEG1	YMR086W	PRP42	Q03776	544 aa	Known RBP	4.16	□□□□□ -1.74
SEG1	YMR086W	ESC2	Q06340	456 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	MCP2	Q06567	569 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	NTG2	Q08214	380 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	KEX2	P13134	814 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	HAP4	P14064	554 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	IDI1	P15496	288 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	MIP1	P15801	1254 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	DBP3	P20447	523 aa	Known RBP	4.16	□□□□□ -1.74
SEG1	YMR086W	SIT1	P39980	628 aa		4.16	□□□□□ -1.74
SEG1	YMR086W	LSM5	P40089	93 aa	Known RBP	4.16	□□□□□ -1.74
SEG1	YMR086W	YIR014W	P40570	242 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms